AT3G17840.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : receptor-like kinase 902 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
receptor-like kinase 902 (RLK902); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor-like kinase 1 (TAIR:AT1G48480.1); Has 143949 Blast hits to 109803 proteins in 3756 species: Archae - 98; Bacteria - 11788; Metazoa - 41712; Fungi - 7708; Plants - 66121; Viruses - 325; Other Eukaryotes - 16197 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:6106092..6108430 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 70409.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.53 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 647 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MRLFFTPSMS NLSIFFSILL LSLPLPSIGD LAADKSALLS FRSAVGGRTL LWDVKQTSPC NWTGVLCDGG RVTALRLPGE TLSGHIPEGI FGNLTQLRTL 101: SLRLNGLTGS LPLDLGSCSD LRRLYLQGNR FSGEIPEVLF SLSNLVRLNL AENEFSGEIS SGFKNLTRLK TLYLENNKLS GSLLDLDLSL DQFNVSNNLL 201: NGSIPKSLQK FDSDSFVGTS LCGKPLVVCS NEGTVPSQPI SVGNIPGTVE GSEEKKKRKK LSGGAIAGIV IGCVVGLSLI VMILMVLFRK KGNERTRAID 301: LATIKHHEVE IPGEKAAVEA PENRSYVNEY SPSAVKAVEV NSSGMKKLVF FGNATKVFDL EDLLRASAEV LGKGTFGTAY KAVLDAVTLV AVKRLKDVTM 401: ADREFKEKIE VVGAMDHENL VPLRAYYYSG DEKLLVYDFM PMGSLSALLH GNKGAGRPPL NWEVRSGIAL GAARGLDYLH SQDPLSSHGN VKSSNILLTN 501: SHDARVSDFG LAQLVSASST TPNRATGYRA PEVTDPRRVS QKADVYSFGV VLLELLTGKA PSNSVMNEEG MDLARWVHSV AREEWRNEVF DSELMSIETV 601: VSVEEEMAEM LQLGIDCTEQ HPDKRPVMVE VVRRIQELRQ SGADRVG |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)