AT4G05380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.993 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G43910.1); Has 20455 Blast hits to 18993 proteins in 2835 species: Archae - 1194; Bacteria - 7265; Metazoa - 2976; Fungi - 2807; Plants - 2284; Viruses - 32; Other Eukaryotes - 3897 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:2737146..2737983 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28241.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.99 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||
| Length | 248 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEPELKNTLI RDLDAFSNGK DFFKTVGRAW KRGYLLYGPP GTGKSSLVAA IANFMNYSIY DLQIQSVKDD AMLRQILTST ENRSILLIED LDCSGADTTC 101: RKENKDETEY GENQNKKKKK DPKVTLSGLL NFVDGLWSSC VEERIIIFTT NHKEKLDPAL LRPGRMDVHI LMDYCTPIVF KKLAALYLEI EEHELFDPIE 201: KMFLEVKATP AEITEKLMVS KDPDVTLKGL VEFLESKKMT KESVDSEI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)