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AT3G26370.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
  • PMID:16618929 (2006): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-fucosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT4G24530.1); Has 827 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJN0eggNOG:ENOG410ZXCEEMBL:AK226720EMBL:AP001298
EMBL:CP002686EnsemblPlants:AT3G26370EnsemblPlants:AT3G26370.1entrez:822241
GeneID:822241GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0016021GO:GO:0016757Gramene:AT3G26370.1hmmpanther:PTHR31933
hmmpanther:PTHR31933:SF1HOGENOM:HOG000240134InterPro:IPR019378InterPro:IPR024709
KEGG:00514+2.4.1.221KEGG:ath:AT3G26370OMA:PWANFVEPfam:PF10250
PhylomeDB:Q9LIN9PIRSF:PIRSF009360Proteomes:UP000006548RefSeq:NP_566791.2
STRING:3702.AT3G26370.1TAIR:AT3G26370TMHMM:TMhelixUniGene:At.37219
unipathway:UPA00378UniProt:Q9LIN9
Coordinates (TAIR10) chr3:+:9656886..9659741
Molecular Weight (calculated) 63370.30 Da
IEP (calculated) 9.00
GRAVY (calculated) -0.42
Length 557 amino acids
Sequence (TAIR10)
(BLAST)
001: MAELRHSSSL GSRSSSSPLR AAGDEDSSSP HVHDHSPNGG DDEDGRPRHP SRDRDRPIWF HSLFPFFGDD PRVSPQKNKI SLLLILILAI ASLISVYGII
101: NHLNAPYLCK KDGIVLNCPH VKESPSPWEN PLSATTSWKP CAERRIGGIS DLPPENETNG YVFIHAEGGL NQQRIAICNA VAVAKIMNAT LILPVLKQDQ
201: IWKDTTKFED IFDVDHFIDY LKDDVRIVRD IPDWFTDKAE LFSSIRRTVK NIPKYAAAQF YIDNVLPRIK EKKIMALKPF VDRLGYDNVP QEINRLRCRV
301: NYHALKFLPE IEQMADSLVS RMRNRTGNPN PYMALHLRFE KGMVGLSFCD FVGTREEKVK MAEYRQKEWP RRFKNGSHLW QLALQKRKEG RCPLEPGEVA
401: VILRAMGYPK ETQIYVASGQ VYGGQNRMAP LRNMFPNLVT KEDLAGKEEL TTFRKHVTSL AALDFLVCLK SDVFVMTHGG NFAKLIIGAR RYMGHRQKSI
501: KPDKGLMSKS FGDPYMGWAT FVEDVVVTHQ TRTGLPEETF PNYDLWENPL TPCMCKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)