AT3G53590.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 204820 Blast hits to 136317 proteins in 4471 species: Archae - 132; Bacteria - 20901; Metazoa - 59546; Fungi - 10595; Plants - 91366; Viruses - 374; Other Eukaryotes - 21906 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:19867379..19871651 | ||||||||||||
| Molecular Weight (calculated) | 87503.90 Da | ||||||||||||
| IEP (calculated) | 7.78 | ||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||
| Length | 783 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWNNLTGRIP LEIGRISSLK LLLLNGNKFT GSLPPELGNL QNLNRLQVDE NNITGSVPFS FGNLRSIKHL HLNNNTISGE IPVELSKLPK LVHMILDNNN 101: LTGTLPLELA QLPSLTILQL DNNNFEGSTI PEAYGHFSRL VKLSLRNCGL QGSIPDLSRI ENLSYLDLSW NHLTGTIPES KLSDNMTTIE LSYNHLTGSI 201: PQSFSDLNSL QLLSLENNSL SGSVPTEIWQ DKSFENNKLQ VDLRNNNFSD ATGNLRTPDN NVKVSPGICL CTAPLSIDYR LKSPSFFFFT PYIERQFREY 301: ITSSLQLETH QLAIDRLVDE NRLRPRMYLK LVPKGRITFN KSEVIRIRDR FMSWSFNKTD FFGPYELLDF PLQGPYGSVV AATVLSVTAT LLYVRKRREN 401: SHTLTKKRVF RTISREIKGV KKFSFVELSD ATNGFDSSTL IGRGSYGKVY KGILSNKTEV AIKRGEETSL QSEKEFLNEI DLLSRLHHRN LVSLIGYSSD 501: IGEQMLVYEY MPNGNVRDWL SVVLHCHAAN AADTLSFSMR SHVALGSAKG ILYLHTEANP PVIHRDIKTS NILLDCQLHA KVADFGLSRL APAFGEGDGE 601: PAHVSTVVRG TPGYLDPEYF MTQQLTVRSD VYSFGVVLLE LLTGMHPFFE GTHIIREVLF LTELPRRSDN GVAKSVRTAN ECGTVLSVAD SRMGQCSPDK 701: VKKLAELALW CCEDRPETRP PMSKVVKELE GICQSVREPE MFSETTKLLC SKTSPSSSSV PSPLSLLPGS NLDSGFFHAV KPR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)