AT5G06820.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.986 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : STRUBBELIG-receptor family 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
STRUBBELIG-receptor family 2 (SRF2); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 8 (TAIR:AT4G22130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:2112994..2116663 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 81303.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.31 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 735 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKTKQQLRFL ATILLTTILF VLAKTDTDPL EVLALQDLYK SLRNPEQLRG WRLEGGDPCG EAWLGISCSG SSIVDLQLRE LKLLGSLGNQ LQHLHNLKIL 101: DVSFNNLEGE IPFGLPPNAT HINMAYNNLT QSIPFSLPLM TSLQSLNLSH NSLSGPLGNV FSGLQIKEMD LSFNNLTGDL PSSFGTLMNL TSLYLQNNRL 201: TGSVIYLADL PLADLNIEDN QFSGIIPSHF QSIPHLWIWG NKFHVEPNYK PWKFPLDVRP LIQNDTGYPT TESSAIMNFP RPETQKVKKK KKGIGAGSTF 301: LLVGGLALLG TFFALFAVRM NHRRAQNLAA IHRSNNSIAY SLPVSTGREY PVATEDNPQI KRFQPPPAPQ LRHLPSPPVR IDKSARRKSF SATCQYPSFA 401: KLFSAAELQL ATNCFSEENL LGEGPLGSVY RAKLPDGQFA VVRNIPMSSL SLHEEEQFTE VLQTASKLRH PNIVTLLGFC IENGEHLLVY EYVGHLSLYN 501: AMHDEVYKPL SWGLRLRIAI GVARALDYLH SSFCPPIAHS DLKATNILLD EELTPRIADC GLASLRPLTS NSVKLRASEI AIQNTGYIAP EHGQPGSSGT 601: KSDTYALGVL LLELLTGRKA FDSSRPRGEQ LLVKWASTRL HDRRSLEQMI DGGIAGTFSS RVASQYADII SLCTQAEKEF RPPVSEIVEA LTALIQKQNK 701: EASSSVADKT DPFSKSFCST RTRFISSPTF SYLSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)