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AT1G34640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : peptidases
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
peptidases; FUNCTIONS IN: peptidase activity; INVOLVED IN: N-terminal protein myristoylation, signal peptide processing; LOCATED IN: endomembrane system, integral to membrane, signal peptidase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2FHeggNOG:ENOG410YTIIEMBL:AC023279EMBL:AY084451
EMBL:BT025585EMBL:CP002684EnsemblPlants:AT1G34640EnsemblPlants:AT1G34640.1
entrez:840368GeneID:840368GO:GO:0005787GO:GO:0006465
GO:GO:0008233GO:GO:0016021Gramene:AT1G34640.1hmmpanther:PTHR38354
hmmpanther:PTHR38354:SF1HOGENOM:HOG000070823InterPro:IPR009542KEGG:00261+3.4.-.-
KEGG:00310+3.4.-.-KEGG:00550+3.4.-.-KEGG:00780+3.4.-.-KEGG:ath:AT1G34640
OMA:EREHDIWPfam:PF06645PhylomeDB:Q9LNM6Proteomes:UP000006548
RefSeq:NP_564450.1TAIR:AT1G34640TMHMM:TMhelixUniGene:At.64021
UniGene:At.71088UniProt:Q9LNM6
Coordinates (TAIR10) chr1:-:12687706..12688427
Molecular Weight (calculated) 12686.50 Da
IEP (calculated) 10.19
GRAVY (calculated) 0.26
Length 110 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNEAALRSS MVGLAVVMVV VWLWTQSLKK TVVTYAVGIS LIGGILLPDW DFFDRSFSRW GYPVTAEERS AALARKSHPS RFRVYPMRMV LYGTVYGYAV
101: YRWWMFVSNY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)