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AT1G17840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:26748395 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:22923678 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : white-brown complex homolog protein 11
Curator
Summary (TAIR10)
Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.
Computational
Description (TAIR10)
white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink).
Protein Annotations
BioGrid:23602eggNOG:COG1131eggNOG:KOG0061EMBL:AC034106
EMBL:AY080792EMBL:AY150457EMBL:CP002684EnsemblPlants:AT1G17840
EnsemblPlants:AT1G17840.1entrez:838363Gene3D:3.40.50.300GeneID:838363
Genevisible:Q8RXN0GO:GO:0005524GO:GO:0005886GO:GO:0009611
GO:GO:0009651GO:GO:0009737GO:GO:0009897GO:GO:0010222
GO:GO:0010588GO:GO:0015245GO:GO:0015908GO:GO:0016021
GO:GO:0042626GO:GO:0042803GO:GO:0055085GO:GO:0080051
Gramene:AT1G17840.1hmmpanther:PTHR19241hmmpanther:PTHR19241:SF271HOGENOM:HOG000166547
InParanoid:Q8RXN0InterPro:IPR003439InterPro:IPR003593InterPro:IPR013525
InterPro:IPR017871InterPro:IPR027417iPTMnet:Q8RXN0KEGG:ath:AT1G17840
OMA:KMPMEEKPaxDb:Q8RXN0Pfam:PF00005Pfam:PF01061
Pfam:Q8RXN0Pfscan:PS50893PhylomeDB:Q8RXN0PIR:E86313
PRIDE:Q8RXN0PRO:PR:Q8RXN0PROSITE:PS00211PROSITE:PS50893
ProteinModelPortal:Q8RXN0Proteomes:UP000006548Reactome:R-ATH-1369062Reactome:R-ATH-265473
RefSeq:NP_173226.2scanprosite:PS00211SMART:SM00382SMR:Q8RXN0
STRING:3702.AT1G17840.1SUPFAM:SSF52540TAIR:AT1G17840tair10-symbols:ABCG11
tair10-symbols:ATWBC11tair10-symbols:COF1tair10-symbols:DSOtair10-symbols:WBC11
TCDB:3.A.1.204.8TMHMM:TMhelixUniGene:At.41813UniGene:At.70679
UniGene:At.74421UniGene:At.75384UniProt:Q8RXN0
Coordinates (TAIR10) chr1:+:6142870..6145894
Molecular Weight (calculated) 78417.00 Da
IEP (calculated) 8.83
GRAVY (calculated) 0.13
Length 703 amino acids
Sequence (TAIR10)
(BLAST)
001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)