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AT4G22130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : STRUBBELIG-receptor family 8
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
STRUBBELIG-receptor family 8 (SRF8); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 6 (TAIR:AT1G53730.1); Has 157986 Blast hits to 122624 proteins in 4302 species: Archae - 115; Bacteria - 15061; Metazoa - 46349; Fungi - 9189; Plants - 68190; Viruses - 340; Other Eukaryotes - 18742 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:FJ708751EnsemblPlants:AT4G22130
EnsemblPlants:AT4G22130.1entrez:828302ExpressionAtlas:C0LGR0ExpressionAtlas:Q6R2J8
Gene3D:3.80.10.10GeneID:828302GO:GO:0004672GO:GO:0005524
GO:GO:0016021Gramene:AT4G22130.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF47
InterPro:IPR000719InterPro:IPR001245InterPro:IPR001611InterPro:IPR011009
InterPro:IPR013210InterPro:IPR032675OMA:RSELLTWPaxDb:C0LGR0
Pfam:PF00560Pfam:PF07714Pfam:PF08263Pfam:Q6R2J8
Pfscan:PS50011PhylomeDB:C0LGR0PRIDE:C0LGR0PROSITE:PS50011
ProteinModelPortal:C0LGR0RefSeq:NP_193944.2SMR:C0LGR0STRING:3702.AT4G22130.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT4G22130tair10-symbols:SRF8
TMHMM:TMhelixUniGene:At.2117UniProt:C0LGR0UniProt:Q6R2J8
Coordinates (TAIR10) chr4:+:11723733..11727331
Molecular Weight (calculated) 76090.70 Da
IEP (calculated) 7.39
GRAVY (calculated) -0.15
Length 703 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIGDRAMFT VLLLFIASIS GFSVVRCVTD PSDVQALQVL YTSLNSPSQL TNWKNGGGDP CGESWKGITC EGSAVVTIDI SDLGVSGTLG YLLSDLKSLR
101: KLDVSGNSIH DTLPYQLPPN LTSLNLARNN LSGNLPYSIS AMGSLSYMNV SGNSLTMSIG DIFADHKSLA TLDLSHNNFS GDLPSSLSTV STLSVLYVQN
201: NQLTGSIDVL SGLPLKTLNV ANNHFNGSIP KELSSIQTLI YDGNSFDNVP ASPQPERPGK KETPSGSKKP KIGSEEKSSD SGKGLSGGVV TGIVFGSLFV
301: AGIIALVLYL CLHKKKRKVR GSTRASQRSL PLSGTPEVQE QRVKSVASVA DLKSSPAEKV TVDRVMKNGS ISRIRSPITA SQYTVSSLQV ATNSFSQENI
401: IGEGSLGRVY RAEFPNGKIM AIKKIDNAAL SLQEEDNFLE AVSNMSRLRH PNIVPLAGYC TEHGQRLLVY EYVGNGNLDD TLHTNDDRSM NLTWNARVKV
501: ALGTAKALEY LHEVCLPSIV HRNFKSANIL LDEELNPHLS DSGLAALTPN TERQVSTQVV GSFGYSAPEF ALSGIYTVKS DVYTFGVVML ELLTGRKPLD
601: SSRTRAEQSL VRWATPQLHD IDALSKMVDP SLNGMYPAKS LSRFADIIAL CIQPEPEFRP PMSEVVQQLV RLVQRASVVK RRSSDDTGFS YRTPEHEHVD
701: ISF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)