AT2G45340.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G51560.1); Has 128804 Blast hits to 78819 proteins in 2294 species: Archae - 81; Bacteria - 6216; Metazoa - 31402; Fungi - 3884; Plants - 74763; Viruses - 171; Other Eukaryotes - 12287 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:18691739..18694466 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75350.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.36 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 691 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSPLTLFLI LFFFFLSSAL SSSSSELDIL LDIKSSLDPE KRFLTSWTPD ADPCSSGSFD GVACDGNRRV ANISLQGMGL TGTIPPSIGL LTSLTGLYLH 101: FNSLTGHIPK DISNLPLLTD LYLNVNNLSG EIPPLIGNLD NLQVIQLCYN KLSGSIPTQF GSLKKITVLA LQYNQLSGAI PASLGDIDTL TRLDLSFNNL 201: FGPVPVKLAG APLLEVLDIR NNSFSGFVPS ALKRLNNGFQ YSNNHGLCGD GFTDLKACTG LNGPNPNRPD PTNPTNFTTV DVKPESADLQ RSNCSNNNGG 301: CSSKSLKSSP LGIVMGLIGS ILAVAIFGGS TFTWYRRRKQ KIGSSLDAMD GRISTEYNFK EVSRRKSSSP LISLEYASGW DPLGRGQSSN NNSALSQEVF 401: ESFMFNLEEI ERATQSFSEI NLLGKSNVSS VYKGILRDGS VAAIKCIAKS SCKSDESEFL KGLKMLTLLK HENLARLRGF CCSKGRGECF LIYEFVPNGN 501: LLQYLDVKDE TGEVLEWATR VSIINGIARG IVYLHGENGN KPAIVHQNLS AEKILIDHWY NPSLADSGLH KLFTDDIVFS KLKASAAMGY LAPEYITTGR 601: FTDKSDVYAF GMILLQILSG KSKISHLMIL QAVESGRLNE DFMDPNLRKN FPEVEAAQLA RLGLLCTHES SNQRPSMEDV IQELNNLAAD Y |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)