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AT2G45340.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G51560.1); Has 128804 Blast hits to 78819 proteins in 2294 species: Archae - 81; Bacteria - 6216; Metazoa - 31402; Fungi - 3884; Plants - 74763; Viruses - 171; Other Eukaryotes - 12287 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G45340-MONOMEReggNOG:ENOG410IEMPeggNOG:ENOG4111HDQEMBL:AC002387
EMBL:CP002685EMBL:FJ708714EnsemblPlants:AT2G45340EnsemblPlants:AT2G45340.1
entrez:819142Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:819142
GO:GO:0004672GO:GO:0005524GO:GO:0016021Gramene:AT2G45340.1
hmmpanther:PTHR27006hmmpanther:PTHR27006:SF18HOGENOM:HOG000237986InterPro:IPR000719
InterPro:IPR001245InterPro:IPR001611InterPro:IPR011009InterPro:IPR013210
InterPro:IPR013320InterPro:IPR032675KEGG:ath:AT2G45340ncoils:Coil
OMA:QQTPQNTPfam:PF00560Pfam:PF07714Pfam:PF08263
Pfam:PF13855Pfscan:PS50011PhylomeDB:O22138PIR:D84889
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_182059.1SMR:O22138
STRING:3702.AT2G45340.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT2G45340
TMHMM:TMhelixUniGene:At.27801UniProt:O22138
Coordinates (TAIR10) chr2:+:18691739..18694466
Molecular Weight (calculated) 75350.20 Da
IEP (calculated) 6.36
GRAVY (calculated) -0.08
Length 691 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSPLTLFLI LFFFFLSSAL SSSSSELDIL LDIKSSLDPE KRFLTSWTPD ADPCSSGSFD GVACDGNRRV ANISLQGMGL TGTIPPSIGL LTSLTGLYLH
101: FNSLTGHIPK DISNLPLLTD LYLNVNNLSG EIPPLIGNLD NLQVIQLCYN KLSGSIPTQF GSLKKITVLA LQYNQLSGAI PASLGDIDTL TRLDLSFNNL
201: FGPVPVKLAG APLLEVLDIR NNSFSGFVPS ALKRLNNGFQ YSNNHGLCGD GFTDLKACTG LNGPNPNRPD PTNPTNFTTV DVKPESADLQ RSNCSNNNGG
301: CSSKSLKSSP LGIVMGLIGS ILAVAIFGGS TFTWYRRRKQ KIGSSLDAMD GRISTEYNFK EVSRRKSSSP LISLEYASGW DPLGRGQSSN NNSALSQEVF
401: ESFMFNLEEI ERATQSFSEI NLLGKSNVSS VYKGILRDGS VAAIKCIAKS SCKSDESEFL KGLKMLTLLK HENLARLRGF CCSKGRGECF LIYEFVPNGN
501: LLQYLDVKDE TGEVLEWATR VSIINGIARG IVYLHGENGN KPAIVHQNLS AEKILIDHWY NPSLADSGLH KLFTDDIVFS KLKASAAMGY LAPEYITTGR
601: FTDKSDVYAF GMILLQILSG KSKISHLMIL QAVESGRLNE DFMDPNLRKN FPEVEAAQLA RLGLLCTHES SNQRPSMEDV IQELNNLAAD Y
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)