AT3G46420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G46400.1); Has 166241 Blast hits to 122387 proteins in 4716 species: Archae - 97; Bacteria - 13657; Metazoa - 44642; Fungi - 9766; Plants - 79355; Viruses - 364; Other Eukaryotes - 18360 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:17082108..17086534 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 93777.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.06 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 838 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESLKKLLLV ALIATSAIHL VQAQNQDGFI SVDCGLSPNE VSPYIEPFTG LQFTTDSNFI ETGKLGRIQA SLEPKYRKSQ TTLRYFPDGI RNCYNLTVTQ 101: GTNYLIRARA IYGNYDGLNI YPKFDLYIGP NFWVTIDLGK YVNGTWEEII YIPKSNMLDV CLVKTGPSTP LISSLVLRPL ANATYITQSG WLKTYVRVYL 201: SDSNDVIRYP DDVYDRIWGS YFEPEWKKIS TTLGVNSSSG FLPPLKALMT AASPANASAP LAIPGVLDFP SDKLYLFLHF SEIQVLKANE TREFEIFWNK 301: KLVYNAYSPV YLQTKTIRNP SPVTCERGEC ILEMIKTERS TLPPLLNAVE VFTVVEFPQP ETDASDVVAI KNIKAIYGLT RVTWQGDPCV PQQFLWNGLN 401: CNSMETSTPP RITSLDLSSS GLTGSISVVI QNLTHLEKLD LSNNNLTGEV PDFLANMKFL VFINLSKNNL NGSIPKALRD RENKGLKLIV DKNVDNCSSG 501: SCTQKKKFPL LIVALTVSLI LVSTVVIDMT NNFQRALGEG GFGVVYHGYL NGSEQVAVKL LSQSSVQGYK EFKAEVELLL RVHHINLVSL VGYCDDRNHL 601: ALVYEYMSNG DLKHHLSGRN NGFVLSWSTR LQIAVDAALG LEYLHIGCRP SMVHRDVKST NILLGEQFTA KMADFGLSRS FQIGDENHIS TVVAGTPGYL 701: DPEYYRTSRL AEKSDIYSFG IVLLEMITSQ HAIDRTRVKH HITDWVVSLI SRGDITRIID PNLQGNYNSR SVWRALELAM SCANPTSEKR PNMSQVVIDL 801: KECLATENST RSEKDMSSHS SDLDRSMNFY TDMVPRAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)