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AT1G64210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G23740.1); Has 142484 Blast hits to 98159 proteins in 3507 species: Archae - 100; Bacteria - 10025; Metazoa - 39740; Fungi - 6315; Plants - 71880; Viruses - 287; Other Eukaryotes - 14137 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G64210-MONOMEReggNOG:COG0515eggNOG:ENOG410IHIJEMBL:AC007764
EMBL:CP002684EnsemblPlants:AT1G64210EnsemblPlants:AT1G64210.1entrez:842726
Gene3D:3.80.10.10GeneID:842726Genevisible:Q9SH71GO:GO:0004672
GO:GO:0005524GO:GO:0005739GO:GO:0005886GO:GO:0016021
Gramene:AT1G64210.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF15HOGENOM:HOG000116554
InParanoid:Q9SH71InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591
InterPro:IPR011009InterPro:IPR013210InterPro:IPR017441InterPro:IPR032675
KEGG:ath:AT1G64210OMA:IMITCFGPaxDb:Q9SH71Pfam:PF00069
Pfam:PF00560Pfam:PF08263Pfam:PF13855Pfam:Q9SH71
Pfscan:PS50011PhylomeDB:Q9SH71PRIDE:Q9SH71PRO:PR:Q9SH71
PROSITE:PS00107PROSITE:PS50011ProteinModelPortal:Q9SH71Proteomes:UP000006548
RefSeq:NP_176603.1scanprosite:PS00107SMART:SM00369SMR:Q9SH71
STRING:3702.AT1G64210.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G64210
TMHMM:TMhelixUniGene:At.66089UniProt:Q9SH71
Coordinates (TAIR10) chr1:+:23831033..23832863
Molecular Weight (calculated) 65334.60 Da
IEP (calculated) 8.12
GRAVY (calculated) -0.08
Length 587 amino acids
Sequence (TAIR10)
(BLAST)
001: MQIFLFFFSL ILCFVLISSQ TLEDDKKALL HFLSSFNSSR LHWNQSSDVC HSWTGVTCNE NGDRIVSVRL PAVGFNGLIP PFTISRLSSL KFLSLRKNHF
101: TGDFPSDFTN LKSLTHLYLQ HNHLSGPLLA IFSELKNLKV LDLSNNGFNG SIPTSLSGLT SLQVLNLANN SFSGEIPNLH LPKLSQINLS NNKLIGTIPK
201: SLQRFQSSAF SGNNLTERKK QRKTPFGLSQ LAFLLILSAA CVLCVSGLSF IMITCFGKTR ISGKLRKRDS SSPPGNWTSR DDNTEEGGKI IFFGGRNHLF
301: DLDDLLSSSA EVLGKGAFGT TYKVTMEDMS TVVVKRLKEV VVGRREFEQQ MEIIGMIRHE NVAELKAYYY SKDDKLAVYS YYNHGSLFEI LHGNRGRYHR
401: VPLDWDARLR IATGAARGLA KIHEGKFIHG NIKSSNIFLD SQCYGCIGDV GLTTIMRSLP QTTCLTSGYH APEITDTRRS TQFSDVYSFG VVLLELLTGK
501: SPVSQAELVP TGGENMDLAS WIRSVVAKEW TGEVFDMEIL SQSGGFEEEM VEMLQIGLAC VALKQQERPH IAQVLKLIED IRSVDAE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)