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AT2G24230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.958
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58150.1); Has 160590 Blast hits to 111718 proteins in 3143 species: Archae - 143; Bacteria - 16976; Metazoa - 54491; Fungi - 7303; Plants - 65091; Viruses - 227; Other Eukaryotes - 16359 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G24230-MONOMERBioGrid:2309EC:2.7.11.1eggNOG:COG4886
eggNOG:ENOG410IFJWEMBL:AC005967EMBL:AY093187EMBL:CP002685
EMBL:FJ708699EnsemblPlants:AT2G24230EnsemblPlants:AT2G24230.1entrez:816957
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:816957Genevisible:C0LGK9
GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT2G24230.1
hmmpanther:PTHR27000hmmpanther:PTHR27000:SF35HOGENOM:HOG000116551InParanoid:C0LGK9
InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591InterPro:IPR011009
InterPro:IPR013320InterPro:IPR032675KEGG:ath:AT2G24230OMA:NDLWELG
PaxDb:C0LGK9Pfam:C0LGK9Pfam:PF00069Pfam:PF00560
Pfam:PF13855Pfscan:PS50011Pfscan:PS51450PhylomeDB:C0LGK9
PIR:B84634PRIDE:C0LGK9PRO:PR:C0LGK9PROSITE:PS50011
PROSITE:PS51450ProteinModelPortal:C0LGK9Proteomes:UP000006548RefSeq:NP_850049.1
SMART:SM00220SMART:SM00369SMR:C0LGK9STRING:3702.AT2G24230.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT2G24230TMHMM:TMhelix
UniGene:At.44784UniProt:C0LGK9
Coordinates (TAIR10) chr2:-:10301979..10304540
Molecular Weight (calculated) 94122.30 Da
IEP (calculated) 5.93
GRAVY (calculated) -0.13
Length 853 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLGLGFWGY ALFLSLFLKQ SHCQEPNTDG FFVSEFYKQM GLSSSQAYNF SAPFCSWQGL FCDSKNEHVI MLIASGMSLS GQIPDNTIGK LSKLQSLDLS
101: NNKISALPSD FWSLNTLKNL NLSFNKISGS FSSNVGNFGQ LELLDISYNN FSGAIPEAVD SLVSLRVLKL DHNGFQMSIP RGLLGCQSLV SIDLSSNQLE
201: GSLPDGFGSA FPKLETLSLA GNKIHGRDTD FADMKSISFL NISGNQFDGS VTGVFKETLE VADLSKNRFQ GHISSQVDSN WFSLVYLDLS ENELSGVIKN
301: LTLLKKLKHL NLAWNRFNRG MFPRIEMLSG LEYLNLSNTN LSGHIPREIS KLSDLSTLDV SGNHLAGHIP ILSIKNLVAI DVSRNNLTGE IPMSILEKLP
401: WMERFNFSFN NLTFCSGKFS AETLNRSFFG STNSCPIAAN PALFKRKRSV TGGLKLALAV TLSTMCLLIG ALIFVAFGCR RKTKSGEAKD LSVKEEQSIS
501: GPFSFQTDST TWVADVKQAN AVPVVIFEKP LLNITFSDLL SATSNFDRDT LLADGKFGPV YRGFLPGGIH VAVKVLVHGS TLSDQEAARE LEFLGRIKHP
601: NLVPLTGYCI AGDQRIAIYE YMENGNLQNL LHDLPFGVQT TDDWTTDTWE EETDNGTQNI GTEGPVATWR FRHKIALGTA RALAFLHHGC SPPIIHRDVK
701: ASSVYLDQNW EPRLSDFGLA KVFGNGLDDE IIHGSPGYLP PEFLQPEHEL PTPKSDVYCF GVVLFELMTG KKPIEDDYLD EKDTNLVSWV RSLVRKNQAS
801: KAIDPKIQET GSEEQMEEAL KIGYLCTADL PSKRPSMQQV VGLLKDIEPK SNQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)