AT2G26730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:11388621..11391286 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 71755.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.61 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 658 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASISWVLNS LFSILLLTQR VNSESTAEKQ ALLTFLQQIP HENRLQWNES DSACNWVGVE CNSNQSSIHS LRLPGTGLVG QIPSGSLGRL TELRVLSLRS 101: NRLSGQIPSD FSNLTHLRSL YLQHNEFSGE FPTSFTQLNN LIRLDISSNN FTGSIPFSVN NLTHLTGLFL GNNGFSGNLP SISLGLVDFN VSNNNLNGSI 201: PSSLSRFSAE SFTGNVDLCG GPLKPCKSFF VSPSPSPSLI NPSNRLSSKK SKLSKAAIVA IIVASALVAL LLLALLLFLC LRKRRGSNEA RTKQPKPAGV 301: ATRNVDLPPG ASSSKEEVTG TSSGMGGETE RNKLVFTEGG VYSFDLEDLL RASAEVLGKG SVGTSYKAVL EEGTTVVVKR LKDVMASKKE FETQMEVVGK 401: IKHPNVIPLR AYYYSKDEKL LVFDFMPTGS LSALLHGSRG SGRTPLDWDN RMRIAITAAR GLAHLHVSAK LVHGNIKASN ILLHPNQDTC VSDYGLNQLF 501: SNSSPPNRLA GYHAPEVLET RKVTFKSDVY SFGVLLLELL TGKSPNQASL GEEGIDLPRW VLSVVREEWT AEVFDVELMR YHNIEEEMVQ LLQIAMACVS 601: TVPDQRPVMQ EVLRMIEDVN RSETTDDGLR QSSDDPSKGS EGQTPPGESR TPPRSVTP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)