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AT2G16030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.529
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26730.1); Has 270 Blast hits to 270 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWUDeggNOG:ENOG410YH8YEMBL:AC007134EMBL:AK229593
EMBL:BT008620EMBL:CP002685EnsemblPlants:AT2G16030EnsemblPlants:AT2G16030.1
entrez:816100Gene3D:3.40.50.150GeneID:816100GO:GO:0008168
GO:GO:0016021Gramene:AT2G16030.1hmmpanther:PTHR10108hmmpanther:PTHR10108:SF914
InterPro:IPR013216InterPro:IPR029063KEGG:ath:AT2G16030OMA:STTAWIQ
Pfam:PF08241PhylomeDB:Q9XII4PIR:H84535Proteomes:UP000006548
RefSeq:NP_179201.1SUPFAM:SSF53335TAIR:AT2G16030TMHMM:TMhelix
UniGene:At.40327UniGene:At.52759UniProt:Q9XII4
Coordinates (TAIR10) chr2:-:6974196..6974891
Molecular Weight (calculated) 25796.30 Da
IEP (calculated) 8.77
GRAVY (calculated) 0.00
Length 231 amino acids
Sequence (TAIR10)
(BLAST)
001: MERNVEKMLK RVSIVFLSIG TVLMVIMILQ TPKTCISPEA PSKPHTHFPR STCDSSPRQH LPLPKKNARI WSSGAWKSRL YSFSTYFLRF RDLGFIQNHT
101: KALCLSAGAG HALMALSQIG LSDVTAVELV DSIPLVKRAD PHNLPFFDGV FDFAFTAHLA EALFPWQFVE EMERTVRRGG FCVVSVDECG GDDVRDIARL
201: FHNSKVVDVA NVTLEGSKKT SILFKVQDSP T
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)