AT1G51790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:19206858..19210574 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 97785.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.61 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 882 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMTSKAKALT FICCVALLNL AIAQDQSGFI SIDCGLQPEN SSYTETSTDI KYVSDSSYTD TGTSYFVAPE NRQNMKQSMW SVRSFPEGIR NCYTIAVNSS 101: TKYLIRADFM YGNYDSRNEI PGFDLHLGPN KWDTVELVSP LQTVSKEIIY YVLTDTIQVC LVNTGNGTPF ISVLELRQLP NSSYAAQSES LQLFQRLDFG 201: STTNLTVRYP NDVFDRIWFP ATPNGTKPLS DPSTSLTSNS TGNFRLPQVV MRTGIVPDNP RGFVDFGWIP DDPSLEFFFY LYFTELQQPN SGTVETREFV 301: ILLNGKSFGE PLSLNYFRTL ALFTSNPLKA ESFQFSLRQT QSSSLPPLIN AMETYFVNKL PQSSTDPNDL SAMRNIKSAY KVKRNWEGDV CVPQAYTWEG 401: LNCSFNGTNM PRVIALNLSS AGLTGEITSD ISRLSQLQIL DLSNNNLSGP AVPAFLAQLQ FLRVLHLANN QLSGPIPSSL IERLDSFSGN PSICSANACE 501: EVSQNRSKKN KLPSFVIPLV ASLAGLLLLF IISAAIFLIL MRKKKQDYGG NETAVDAFDL EPSNRKFTYA EIVNITNGFD RDQGKVGFGR NYLGKLDGKE 601: VTVKLVSSLS SQGYKQLRAE VKHLFRIHHK NLITMLGYCN EGDKMAVIYE YMANGNLKQH ISENSTTVFS WEDRLGIAVD VAQGLEYLHT GCKPPIIHRN 701: VKCTNVFLDE SFNAKLGGFG LSRAFDAAEG SHLNTAIAGT PGYVDPEYYT SNMLTEKSDV YSFGVVLLEI VTAKPAIIKN EERMHISQWV ESLLSRENIV 801: EILDPSLCGD YDPNSAFKTV EIAVACVCRN SGDRPGMSQV VTALKESLAV EVERKKHLPV GSTDSLEELA LGFGSNPPPR LR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)