AT3G08680.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 128832 Blast hits to 96760 proteins in 3128 species: Archae - 71; Bacteria - 9985; Metazoa - 33545; Fungi - 6918; Plants - 64071; Viruses - 347; Other Eukaryotes - 13895 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:2638591..2640590 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 69410.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.78 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 640 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MMKIIAAFLF LLVTTFVSRC LSADIESDKQ ALLEFASLVP HSRKLNWNST IPICASWTGI TCSKNNARVT ALRLPGSGLY GPLPEKTFEK LDALRIISLR 101: SNHLQGNIPS VILSLPFIRS LYFHENNFSG TIPPVLSHRL VNLDLSANSL SGNIPTSLQN LTQLTDLSLQ NNSLSGPIPN LPPRLKYLNL SFNNLNGSVP 201: SSVKSFPASS FQGNSLLCGA PLTPCPENTT APSPSPTTPT EGPGTTNIGR GTAKKVLSTG AIVGIAVGGS VLLFIILAII TLCCAKKRDG GQDSTAVPKA 301: KPGRSDNKAE EFGSGVQEAE KNKLVFFEGS SYNFDLEDLL RASAEVLGKG SYGTTYKAIL EEGTTVVVKR LKEVAAGKRE FEQQMEAVGR ISPHVNVAPL 401: RAYYFSKDEK LLVYDYYQGG NFSMLLHGNN EGGRAALDWE TRLRICLEAA RGISHIHSAS GAKLLHGNIK SPNVLLTQEL HVCVSDFGIA PLMSHHTLIP 501: SRSLGYRAPE AIETRKHTQK SDVYSFGVLL LEMLTGKAAG KTTGHEEVVD LPKWVQSVVR EEWTGEVFDV ELIKQQHNVE EEMVQMLQIA MACVSKHPDS 601: RPSMEEVVNM MEEIRPSGSG PGSGNRASSP EMIRSSDSPV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)