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AT3G46330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
maternal effect embryo arrest 39 (MEE39); FUNCTIONS IN: kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G46400.1); Has 157192 Blast hits to 122633 proteins in 4636 species: Archae - 101; Bacteria - 13531; Metazoa - 44718; Fungi - 9899; Plants - 69914; Viruses - 393; Other Eukaryotes - 18636 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G46330-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IF1S
EMBL:AK228880EMBL:AK229346EMBL:AL133298EMBL:CP002686
EMBL:FJ708732EnsemblPlants:AT3G46330EnsemblPlants:AT3G46330.1entrez:823778
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:823778Genevisible:C0LGP2
GO:GO:0004674GO:GO:0005524GO:GO:0009793GO:GO:0009960
GO:GO:0016021Gramene:AT3G46330.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF44
HOGENOM:HOG000116550InParanoid:C0LGP2InterPro:IPR000719InterPro:IPR001245
InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441InterPro:IPR024788InterPro:IPR032675iPTMnet:C0LGP2
KEGG:ath:AT3G46330OMA:NSALAFRPaxDb:C0LGP2Pfam:C0LGP2
Pfam:PF07714Pfam:PF12819Pfam:PF13855Pfscan:PS50011
Pfscan:PS51450PhylomeDB:C0LGP2PIR:T45690PRIDE:C0LGP2
PRO:PR:C0LGP2PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS51450ProteinModelPortal:C0LGP2Proteomes:UP000006548RefSeq:NP_190217.2
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:C0LGP2
STRING:3702.AT3G46330.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT3G46330
tair10-symbols:MEE39TMHMM:TMhelixUniGene:At.35937UniGene:At.50682
UniProt:C0LGP2
Coordinates (TAIR10) chr3:-:17020887..17024884
Molecular Weight (calculated) 98683.60 Da
IEP (calculated) 7.22
GRAVY (calculated) -0.21
Length 878 amino acids
Sequence (TAIR10)
(BLAST)
001: MKNLCWVFLS LFWFGVFLII RFAEGQNQEG FISLDCGLPL NEPPYIESET GIQFSSDENF IQSGKTGRIP KNLESENLKQ YATLRYFPDG IRNCYDLRVE
101: EGRNYLIRAT FFYGNFDGLN VSPEFDMHIG PNKWTTIDLQ IVPDGTVKEI IHIPRSNSLQ ICLVKTGATI PMISALELRP LANDTYIAKS GSLKYYFRMY
201: LSNATVLLRY PKDVYDRSWV PYIQPEWNQI STTSNVSNKN HYDPPQVALK MAATPTNLDA ALTMVWRLEN PDDQIYLYMH FSEIQVLKAN DTREFDIILN
301: GETINTRGVT PKYLEIMTWL TTNPRQCNGG ICRMQLTKTQ KSTLPPLLNA FEVYSVLQLP QSQTNEIEVV AIKNIRTTYG LSRISWQGDP CVPKQFLWDG
401: LNCNITDISA PPRIISLNLS SSGLSGTIVS NFQNLAHLES LDLSNNSLSG IVPEFLATMK SLLVINLSGN KLSGAIPQAL RDREREGLKL NVLGNKELCL
501: SSTCIDKPKK KVAVKVVAPV ASIAAIVVVI LLFVFKKKMS SRNKPEPWIK TKKKRFTYSE VMEMTKNLQR PLGEGGFGVV YHGDLNGSEQ VAVKLLSQTS
601: AQGYKEFKAE VELLLRVHHI NLVNLVGYCD EQDHFALIYE YMSNGDLHQH LSGKHGGSVL NWGTRLQIAI EAALGLEYLH TGCKPAMVHR DVKSTNILLD
701: EEFKAKIADF GLSRSFQVGG DQSQVSTVVA GTLGYLDPEY YLTSELSEKS DVYSFGILLL EIITNQRVID QTRENPNIAE WVTFVIKKGD TSQIVDPKLH
801: GNYDTHSVWR ALEVAMSCAN PSSVKRPNMS QVIINLKECL ASENTRISRN NQNMDSGHSS DQLNVTVTFD TDVKPKAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)