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AT3G56100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:22318864 (2012): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : meristematic receptor-like kinase
Curator
Summary (TAIR10)
Protein kinase expressed in meristematic cells. Phosphorylates AGL24.
Computational
Description (TAIR10)
meristematic receptor-like kinase (MRLK); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 154347 Blast hits to 110289 proteins in 3296 species: Archae - 124; Bacteria - 13554; Metazoa - 45622; Fungi - 8090; Plants - 69121; Viruses - 344; Other Eukaryotes - 17492 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT3G56100EnsemblPlants:AT3G56100.1entrez:824776hmmpanther:PTHR27008
hmmpanther:PTHR27008:SF27Pfam:PF07714Pfam:PF08263Pfam:PF13855
Pfscan:PS50011Pfscan:PS51450tair10-symbols:IMK3tair10-symbols:MRLK
TMHMM:TMhelix
Coordinates (TAIR10) chr3:-:20817074..20819517
Molecular Weight (calculated) 77334.40 Da
IEP (calculated) 7.91
GRAVY (calculated) -0.01
Length 719 amino acids
Sequence (TAIR10)
(BLAST)
001: MEFITQNQAI TSLSMINTDI DQPKASLRSR FLLHLIICLL FFVPPCSSQA WDGVVITQAD YQGLQAVKQE LIDPRGFLRS WNGSGFSACS GGWAGIKCAQ
101: GQVIVIQLPW KSLGGRISEK IGQLQALRKL SLHDNNLGGS IPMSLGLIPN LRGVQLFNNR LTGSIPASLG VSHFLQTLDL SNNLLSEIIP PNLADSSKLL
201: RLNLSFNSLS GQIPVSLSRS SSLQFLALDH NNLSGPILDT WGSKIRGTLP SELSKLTKLR KMDISGNSVS GHIPETLGNI SSLIHLDLSQ NKLTGEIPIS
301: ISDLESLNFF NVSYNNLSGP VPTLLSQKFN SSSFVGNSLL CGYSVSTPCP TLPSPSPEKE RKPSHRNLST KDIILIASGA LLIVMLILVC VLCCLLRKKA
401: NETKAKGGEA GPGAVAAKTE KGGEAEAGGE TGGKLVHFDG PMAFTADDLL CATAEIMGKS TYGTVYKATL EDGSQVAVKR LRERSPKVKK REKLVVFDYM
501: SRGSLATFLH ARGPDVHINW PTRMSLIKGM ARGLFYLHTH ANIIHGNLTS SNVLLDENIT AKISDYGLSR LMTAAAGSSV IATAGALGYR APELSKLKKA
601: NTKTDVYSLG VIILELLTGK SPSEALNGVD LPQWVATAVK EEWTNEVFDL ELLNDVNTMG DEILNTLKLA LHCVDATPST RPEAQQVMTQ LGEIRPEETT
701: ATTSEPLIDV PEASASTSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)