AT3G15550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species: Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:5267351..5270095 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 84805.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.49 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.90 | ||||||||||||||||||||||||
| Length | 729 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMGDYGITEE DLVIEEAQGY PRAYTKICRD FDAFPYKNGP PFTFMPYILQ QNESLRCREV DQMFPVIDPK ARPTTKPKIF LSLLWKQLNH LGNAGFDPAV 101: IRIDPYGNVV YFHADSASPL AWSFDHWFPC SRGGLTVPSN LRIVQWQARK NKKDKLEFLV PWWDLQVGIS VNQFLSIFAA SSSDFRRRAF SFLFKEGENE 201: ELNGIQMVES HHFPQHFVES KDKFGLASAA VVFSRRDPYD PSLVLRSLDY NRQTPARKMR FGATKENETP DLMKNPYQAI VAARDSLRHR EEAQNMRAEM 301: KKLDDETNDL TRKNNEDRLT IQELENELVK RRRRAEKCRR LAESQCSYRN TLEKMIRDAM HQSVVYKEQV RLNQAASSAL MARLEAQKAI CDGSEKELHK 401: KFKEREELEN LVKPELEKAR KRSRLLLNDE DDLLLDDRDR NLSLYLPGTS EETSSHKELR VHFEEEHKAA ASEAEIKKHC EIEEEEEEQK TPEVSEKSLV 501: ALEDDKPVEE KPDVEEGKRS NRSFRAFHVF KAPENEEDEE SRRERGKGNV EKWLHILLEN NSKSDPHDLQ TEKSKKIDEM IEKLDHKFPF LEKVDEEEVD 601: LKLQAKEANN NTSKVDEEEV DLQLQAKETN NNTSKVEIRT ESSRRSRMSF DLKNTPEKSG RDKVVKRSES ARTFTRIPSS PSLIFGMKKG IDCIRKKPVV 701: SGNDDENEYL VKNNFIKSSL QTIKRAVKF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)