AT4G14330.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: phragmoplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 1 (TAIR:AT4G21270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:8244228..8247286 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 97424.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.90 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.66 | ||||||||||||||||||||||||||||||||||||||||
| Length | 869 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAPTPSSSRS NQTQYTLIRT PQTKQRLNFH SKTPNPDGSK DPSPPEHPVE VIGRIRDYPD RKEKSPSILQ VNTDNQTVRV RADVGYRDFT LDGVSFSEQE 101: GLEEFYKKFI EERIKGVKVG NKCTIMMYGP TGAGKSHTMF GCGKEPGIVY RSLRDILGDS DQDGVTFVQV TVLEVYNEEI YDLLSTNSSN NLGIGWPKGA 201: STKVRLEVMG KKAKNASFIS GTEAGKISKE IVKVEKRRIV KSTLCNERSS RSHCIIILDV PTVGGRLMLV DMAGSENIDQ AGQTGFEAKM QTAKINQGNI 301: ALKRVVESIA NGDSHVPFRD SKLTMLLQDS FEDDKSKILM ILCASPDPKE MHKTLCTLEY GAKAKCIVRG SHTPNKDKYG GDESASAVIL GSRIAAMDEF 401: IIKLQSEKKQ KEKERNEAQK QLKKKEEEVA ALRSLLTQRE ACATNEEEIK EKVNERTQLL KSELDKKLEE CRRMAEEFVE MERRRMEERI VQQQEELEMM 501: RRRLEEIEVE FRRSNGGSVD ETSGFAKRLR SLYSDDDPGM VKSMDLDMGD PEPVKQVWGA VSHQSSNTIS SNFTNLLQPK PSENMLTQMY PDRVCLSTVF 601: EEEEVEEEEE KVIVEDKSIC LITTPMPSLN SEGLGKENCF NGADDKESAS SRRLRIQNIF TLCGNQRELS QHSGQEEDQA NIASPDKKDN QFFSITNKAE 701: ALAVEEAKEN NISVDQRENG QLDIYVKWET AADNPRKLIT TLRVTKDATL ADLRKLIEIY LGSDNQAFTF LKLGEPCGAQ VAKEKESTVQ ATSLPLCNGH 801: AYLATLRPGK SSQHKSLQPA SPLPLNPIEN MMEVTPISKV TPNHQVDEFS SPNLVAHLSS TPFITLRRH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)