AT1G72250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Di-glucose binding protein with Kinesin motor domain | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Di-glucose binding protein with Kinesin motor domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Malectin/receptor-like protein kinase (InterPro:IPR021720), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2); Has 13009 Blast hits to 12135 proteins in 495 species: Archae - 49; Bacteria - 371; Metazoa - 5707; Fungi - 1550; Plants - 1898; Viruses - 27; Other Eukaryotes - 3407 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:27192902..27198118 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 133392.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.45 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.56 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1195 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEDCCDPLLA TDASPRPESF SRSEKDIASR SRTVAMADLD SNCELSNDVD MEQSSPDLMK LEQSSDPVAL DGKVVLGFSL ASPDLVNCGA SPDLPRGSYE 0101: DSPEFSKKRR FSTELSLENG IDGSTTTTRL GRKSQVVKFS AICQTFGYEL SPESSFELPS PPGDFRESMT PVISINSGSI STDVTVEDVT FLKDEFFSGG 0201: ESITTDAVVG NEDEILLYQT ARLGNFAYKF QSLDPGDYFI DLHFAEIEFT KGPPGVISGL DLFSQVGANT PLVIEDLRML VGREGELSIR LEGVTGAAIL 0301: CGISIRKETT ATYVEETGML AVKGSTDTVL SQQTQENLVC RAEEEAEGMR SDCEQQRKEM EDMKRMVEEL KLENQQKTRE CEEALNSLSE IQNELMRKSM 0401: HVGSLGTSQR EEQMVLFIKR FDKKIEVEQI KLLEEATTYK HLVQDINEFS SHIQSRVKQD AELHENLKVK FVAGEKERKE LYNKILELKG NIRVFCRCRP 0501: LNFEETEAGV SMGIDVESTK NGEVIVMSNG FPKKSFKFDS VFGPNASQAD VFEDTAPFAT SVIDGYNVCI FAYGQTGTGK TFTMEGTQHD RGVNYRTLEN 0601: LFRIIKAREH RYNYEISVSV LEVYNEQIRD LLVPASQSAS APKRFEIRQL SEGNHHVPGL VEAPVKSIEE VWDVLKTGSN ARAVGKTTAN EHSSRSHCIH 0701: CVMVKGENLL NGECTKSKLW LVDLAGSERV AKTEVQGERL KETQNINKSL SALGDVIFAL ANKSSHIPFR NSKLTHLLQD SLGGDSKTLM FVQISPNEND 0801: QSETLCSLNF ASRVRGIELG PAKKQLDNTE LLKYKQMVEK WKQDMKGKDE QIRKMEETMY GLEAKIKERD TKNKTLQDKV KELESQLLVE RKLARQHVDT 0901: KIAEQQTKQQ TEDENNTSKR PPLTNILLGS ASKEMVNLTR PSLLESTTSY DLAPLPSGVP KYNDLSEKEN NPEMADQVHL PNKTGRFSIC AKRIPSAPAP 1001: RRSSLAPTTS TSREMVYLTR PPLSESTTSY DLPPLPNGGL KYSDLIEKVN NQEMAEQVQI PKRIGAGRSS ICAKRIPPAP RRKSFAPMPF IPITSTLTSP 1101: DEKSGANQVL CTSPKLHRSN GKTLTSILRR SIQKRMQMKP SPRQQPMRRG GGINVGMERV RLSIGNRGRL AHRVLLTNAR KAGLKETPQK QERWI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)