AT4G26660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin-related protein (InterPro:IPR010544); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55520.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:13448754..13451814 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 90453.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.84 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.83 | ||||||||||||||||||||||||||||||||
| Length | 806 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSPAILSEN RFLGSITSSS IRNLLPKSIS GKQKPIIQNP DTKIPRSNDE NAIPVDPNQK ASDHHTALQF TKQSDSKDGN FGEPIKDNKM GQSTFAEDKR 101: SLLDSPLKVE SRSILSRRTN SVPSEIKEED DDDSLGDQIR ELKEELIRTK SDGYNKADAS KSGHFARDSL SQLRVSINKS LLMSCPKRDE SEGKEVIVDG 201: EDVLELNKHI EKLHGSYDSV HSSFASASCY EADSMSGDDE DVCSEDLEKP MHGNHKDVDF VDNDPSQLDN VEFDTTGSGI SIRSQLPSCV LEEPIFSESP 301: KFKNVQKSVA ASTKFSANPR NVSESSNIGD MKVNQISPCM SKKVSGPTDS LAASLQRGLQ IIDYHQGSSL SKSSSVSFSF GHMALKPCAE GENLNASVQS 401: FRKDKASEGG LSSILLCLSC RKKVDQEAEV TEEAGSNEKH LKNMCMEQAA KIEELTLLLR KSDDGEDGTE FIKETYETKQ ISEEFGKTNF EVSEKEALLK 501: EIADLKSKLQ PTKSTDNLRS SLLLRSIQMR KSIDVSRNGE NSDDLAKERE MWTEMESEWI SLTDDLRMDI DNHRSRAENL EFELKQEKLA TEELNDALTR 601: AVLGHSRFIE QYTELQETYN ELGEKHSVMM AGITDVKKAA SKAAMNGRHG KRFAKAFSDE LSAIRAEKEK ERELLKKENK NLRTQLRDTA EAVQAAGELL 701: VRLRESEQAL QVSEERFSVV EEEKERLKKQ MEQLKSKHKT EIGTMKQYLA ESKLPGSALL QPWYKDEEDE IEQVSEHETG AVSFDDYEDD QAWRAEFGAT 801: YQDHHY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)