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AT1G25320.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01210.1); Has 141432 Blast hits to 94435 proteins in 2977 species: Archae - 110; Bacteria - 10539; Metazoa - 37556; Fungi - 5883; Plants - 72805; Viruses - 219; Other Eukaryotes - 14320 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G25320-MONOMEReggNOG:COG0515eggNOG:ENOG410IKCAEMBL:AC079374
EMBL:AY056441EMBL:BT010471EMBL:CP002684EMBL:FJ708637
EnsemblPlants:AT1G25320EnsemblPlants:AT1G25320.1entrez:839116Gene3D:3.80.10.10
GeneID:839116GO:GO:0004672GO:GO:0005524GO:GO:0005886
GO:GO:0016021Gramene:AT1G25320.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF11
HOGENOM:HOG000116554InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591
InterPro:IPR011009InterPro:IPR013210InterPro:IPR032675KEGG:ath:AT1G25320
Pfam:PF00069Pfam:PF00560Pfam:PF08263Pfam:PF13855
Pfscan:PS50011PhylomeDB:Q9FRI1PIR:A86383PROSITE:PS50011
Proteomes:UP000006548RefSeq:NP_564228.1SMART:SM00369SMR:Q9FRI1
STRING:3702.AT1G25320.1SUPFAM:SSF52058SUPFAM:SSF56112SwissPalm:Q9FRI1
TAIR:AT1G25320TMHMM:TMhelixUniGene:At.48236UniProt:Q9FRI1
Coordinates (TAIR10) chr1:+:8877988..8880180
Molecular Weight (calculated) 76435.10 Da
IEP (calculated) 6.16
GRAVY (calculated) -0.07
Length 702 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVGSLLFMF LLIWNFNGEL NALNDEGFAL LTLKQSISKD PDGSLSNWNS ENQNPCSWNG VTCDDNKVVV SLSIPKKKLL GYLPSSLGLL SNLRHLNLRS
101: NELSGNLPVE LFKAQGLQSL VLYGNFLSGS IPNEIGDLKF LQILDLSRNS LNGSIPESVL KCNRLRSFDL SQNNLTGSVP SGFGQSLASL QKLDLSSNNL
201: IGLVPDDLGN LTRLQGTLDL SHNSFSGSIP ASLGNLPEKV YVNLAYNNLS GPIPQTGALV NRGPTAFLGN PRLCGPPLKD PCLPDTDSSS TSHPFVPDNN
301: EQGGGGSKKG EGLSKTAIVA IVVCDFIGIC IVGFLFSCCY LKICARRNSV DEEGYVLEKE GKEKKGSFCF RRDGSESPSS ENLEPQQDLV LLDKHIALDL
401: DELLKASAFV LGKGGNGIVY KVVLEDGLTV AVRRLGEGGS QRCKEFQTEV EAIGKLRHPN IVSLKAYYWS VEEKLLIYDY IPNGSLTNAL HGNPGMVSFK
501: PLSWGVRLKI MRGISRGLVY LHEFSPKKYV HGSLKLSNIL LGQDMEPHIS DFGLMHLSSI AGTLESTTVD RPSNKTASSI GSSANLSSFY LAPEATKATV
601: KPSQKWDVYS FGVILLEMIT GRLPIVFVGK SEMEIVKWIQ MCIDEKKEMS DILDPYLVPN DTEIEEEVIA VLKIAMACVS TSPEKRPPMK HIADALTQIC
701: LQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)