AT2G28990.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.751 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G28970.1); Has 164585 Blast hits to 121622 proteins in 4513 species: Archae - 85; Bacteria - 13458; Metazoa - 43809; Fungi - 9980; Plants - 78212; Viruses - 403; Other Eukaryotes - 18638 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:12455055..12459541 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 98761.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 884 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKIHLLLAMI GTFVVIIGAQ DQEGFISLDC GLPSDESPYD DSFNGLTFTS DSTFIQTGKI DSVDKDLNIN LSKQYLTLRY FPEGKRNCYS LDVKRGTTYL 101: IVVSFVYGNY DGLNRDPNFD IHLGPNKWKR IDLDGEKEGT REEIIHKARS NSLDICLVKT GETLPIISAI EIRPLRNNTY VTQSGSLMMS FRVYLSNSDA 201: SIRYADDVHD RIWSPFNGSS HTHITTDLNI NNSNAYEIPK NILQTAAIPR NASAPLIITW DPLPINAEVY LYMHFAEIQT LEANETRQFD VILRGNFNHS 301: GFSPTKLKVF TLYTEEPMKC GSEGCYLQLV KTPNSTLPPL INAIEAYSVI EFSQLETSLS DVDAIKNIKN TYKLNKITWQ GDPCLPQDLS WESIRCTYVD 401: GSTSPTIISL DLSKSGLNGS IPQILQNFTQ LQELDLSNNS LTGPVPIFLA NMKTLSLINL SGNNLSGSVP QALLDKEKEG LVLKLEGNPD LCKSSFCNTE 501: KKNKFLLPVI ASAASLVIVV VVVALFFVFR KKKASPSNLH APPSMPVSNP GHNSQSESSF TSKKIRFTYS EVQEMTNNFD KALGEGGFGV VYHGFVNVIE 601: QVAVKLLSQS SSQGYKHFKA EVELLMRVHH INLVSLVGYC DEGEHLALIY EYMPNGDLKQ HLSGKHGGFV LSWESRLKIV LDAALGLEYL HTGCVPPMVH 701: RDIKTTNILL DQHLQAKLAD FGLSRSFPIG NEKNVSTVVA GTPGYLDPEY YQTNWLTEKS DIYSFGIVLL EIISNRPIIQ QSREKPHIVE WVSFMITKGD 801: LRSIMDPNLH QDYDIGSVWK AIELAMSCVS LSSARRPNMS RVVNELKECL ISETSRIGEG RDMESKGSME FSRDIYNEVI PQAR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)