AT2G23300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G37250.1); Has 130463 Blast hits to 92142 proteins in 3849 species: Archae - 98; Bacteria - 10554; Metazoa - 34539; Fungi - 5704; Plants - 66254; Viruses - 237; Other Eukaryotes - 13077 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:9914608..9917130 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84153.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.32 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 773 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKTQSASPFF FVSFFFFFFF FSSLFLLSSA LNSDGVLLLS FKYSVLLDPL SLLQSWNYDH DNPCSWRGVL CNNDSRVVTL SLPNSNLVGS IPSDLGFLQN 101: LQSLNLSNNS LNGSLPVEFF AADKLRFLDL SNNLISGEIP VSIGGLHNLQ TLNLSDNIFT GKLPANLASL GSLTEVSLKN NYFSGEFPGG GWRSVQYLDI 201: SSNLINGSLP PDFSGDNLRY LNVSYNQISG EIPPNVGAGF PQNATVDFSF NNLTGSIPDS PVYLNQKSIS FSGNPGLCGG PTRNPCPIPS SPATVSPPTS 301: TPALAAIPKS IGSNRETEPN NNSNPRTGLR PGVIIGIIVG DIAGIGILAL IFFYVYKYKN NKTVEKKNNH SLEAHEAKDT TSLSPSSSTT TSSSSPEQSS 401: RFAKWSCLRK NQETDETEEE DEENQRSGEI GENKKGTLVT IDGGEKELEV ETLLKASAYI LGATGSSIMY KTVLEDGTVL AVRRLGENGL SQQRRFKDFE 501: AHIRAIGKLV HPNLVRLRGF YWGTDEKLVI YDFVPNGSLV NARYRKGGSS PCHLPWETRL KIVKGLARGL AYLHDKKHVH GNLKPSNILL GQDMEPKIGD 601: FGLERLLAGD TSYNRASGSS RIFSSKRLTA SSREFGTIGP TPSPSPSSVG PISPYCAPES LRNLKPNPKW DVFGFGVILL ELLTGKIVSI DEVGVGNGLT 701: VEDGNRALIM ADVAIRSELE GKEDFLLGLF KLGYSCASQI PQKRPTMKEA LVVFERYPIS SSAKSPSYHY GHY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)