AT1G28390.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.919 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G51990.1); Has 101909 Blast hits to 100959 proteins in 2971 species: Archae - 79; Bacteria - 11366; Metazoa - 36596; Fungi - 8457; Plants - 30559; Viruses - 339; Other Eukaryotes - 14513 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:9966814..9968226 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 53078.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 10.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 470 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGYLSCNGES AVAICDTYNW NPRRRSKVPE KRHPPKLRVF NYDELAVATN GFSANNFLGK GSHGRVYKAV LDDGKLLAAV KRTTITTTVG NNNNNVSQVD 101: NEIEILSRVR HRWMVNLIGY CVDHRRKTKL LVVEYMPNGT LHDQLHSRSS LDSRLSSWNR RIKHALQIAI AVHALHTAET QVIHRDIKSC NVLIDGDGNA 201: RLADFGLALI GNVDDERLKY TPPAGTLGYL DPSYLAPADL TAKSDVFSFG ILLLEIISGR EAIDLNYSPS CIVDWAVPLI KRGDYDAICD LKIKNRPYYA 301: VIRKLAVMAA RCVRSTAKKR PDMLEVVECL KTVRQLSPAW NKLRRRSEER SENVLAVEEE KEEIHVRIVR GGSRKNRKVS NVTTSVDDVY ERLVPEETLP 401: FRRRNFVLRS RSVGAKVGPD PYDGFGDETV VTMRLLIEKE RPVTTAAMRL SKSRSVGIVR SHKTASRKRY |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)