AT1G14390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G02780.1); Has 96517 Blast hits to 51613 proteins in 1566 species: Archae - 24; Bacteria - 6061; Metazoa - 18233; Fungi - 1323; Plants - 64840; Viruses - 89; Other Eukaryotes - 5947 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:4924277..4926794 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 82283.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.70 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 747 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHSSSKSQAF SLTFLLFLFL LPSVSESQLI SSESRTLLEI QKHLQYPPTL RSWSNWTNFC YLPSSPSFKI LCFNGHVTEL TVTGNRTVKL PGRFSSDSLF 101: TVLTKLSNLK TLSLVSLGIS GPLPSQIIRL SSSLQSLNLS SNFISGNIPK EISSLKNLRS LVLANNLFNG SVPDLRGLSN LQELNLGGNK LGPEVVPSLA 201: SNLITISLKN NSFGSKIPEQ IKKLNKLQSL DLSSNKFTGS IPRFLLSLPS LQNLSLAQNL LSGSLPNSSL CNSKLRILDV SRNLLTGKLP SCFSSKKQTV 301: LLFTFNCLSI NGSPSAKYQR PVTFCENEAK QAVAAVKSDT KDKERKEEDT GIELGLVIGI IIGVILVSAV LAGLVLVRMR KSRSKEEPLE ANNVDQVTVC 401: SNTTRSTTSK TVPDLRRVPQ TMRSAVIGLS PYRVFSLEEL EEATNNFDAE NLCGEQLYKG CLREGIAVTV RCIKLKQKNS TQNLAQQMEV LSKLRHMHLV 501: SVLGHCIGTY QDHHPYAGST IFIVQEYISN GSLRDYLTDW RKKEVLKWPQ RMSIAIGVAR GIQFLHTGVA PGIFGNNLEI ENVLLDETLT VKLSGYSIPL 601: PSKLLIFSLT SHEIYNLLGE FQVGAESPSN EDGEKEDVYQ FGVILIQIIT GKVIAAASSE LGSLKLQLEN SLRDEPSVLR SLADPCVRGT YAYESLRTTV 701: EFAINCLCED QRKRPSIEDV VWNLQYTIQV QQGWTSSENL GLGGSEL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)