AT1G17750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : PEP1 receptor 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes PEPR2, a plasma membrane leucine-rich repeat receptor kinase functioning as a receptor for the Pep1 and Pep2 peptides. Pep1 and Pep2 are amino acids that induce the transcription of defense-related genes. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
PEP1 receptor 2 (PEPR2); FUNCTIONS IN: protein serine/threonine kinase activity, peptide binding, kinase activity, ATP binding; INVOLVED IN: response to jasmonic acid stimulus, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, defense response to bacterium, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PEP1 receptor 1 (TAIR:AT1G73080.1); Has 253253 Blast hits to 143216 proteins in 4736 species: Archae - 167; Bacteria - 25668; Metazoa - 79287; Fungi - 11782; Plants - 106533; Viruses - 446; Other Eukaryotes - 29370 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:6106656..6110008 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 119184.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1088 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MRNLGLLEIT LLCSLFVYFR IDSVSSLNSD GLALLSLLKH FDKVPLEVAS TWKENTSETT PCNNNWFGVI CDLSGNVVET LNLSASGLSG QLGSEIGELK 0101: SLVTLDLSLN SFSGLLPSTL GNCTSLEYLD LSNNDFSGEV PDIFGSLQNL TFLYLDRNNL SGLIPASVGG LIELVDLRMS YNNLSGTIPE LLGNCSKLEY 0201: LALNNNKLNG SLPASLYLLE NLGELFVSNN SLGGRLHFGS SNCKKLVSLD LSFNDFQGGV PPEIGNCSSL HSLVMVKCNL TGTIPSSMGM LRKVSVIDLS 0301: DNRLSGNIPQ ELGNCSSLET LKLNDNQLQG EIPPALSKLK KLQSLELFFN KLSGEIPIGI WKIQSLTQML VYNNTLTGEL PVEVTQLKHL KKLTLFNNGF 0401: YGDIPMSLGL NRSLEEVDLL GNRFTGEIPP HLCHGQKLRL FILGSNQLHG KIPASIRQCK TLERVRLEDN KLSGVLPEFP ESLSLSYVNL GSNSFEGSIP 0501: RSLGSCKNLL TIDLSQNKLT GLIPPELGNL QSLGLLNLSH NYLEGPLPSQ LSGCARLLYF DVGSNSLNGS IPSSFRSWKS LSTLVLSDNN FLGAIPQFLA 0601: ELDRLSDLRI ARNAFGGKIP SSVGLLKSLR YGLDLSANVF TGEIPTTLGA LINLERLNIS NNKLTGPLSV LQSLKSLNQV DVSYNQFTGP IPVNLLSNSS 0701: KFSGNPDLCI QASYSVSAII RKEFKSCKGQ VKLSTWKIAL IAAGSSLSVL ALLFALFLVL CRCKRGTKTE DANILAEEGL SLLLNKVLAA TDNLDDKYII 0801: GRGAHGVVYR ASLGSGEEYA VKKLIFAEHI RANQNMKREI ETIGLVRHRN LIRLERFWMR KEDGLMLYQY MPNGSLHDVL HRGNQGEAVL DWSARFNIAL 0901: GISHGLAYLH HDCHPPIIHR DIKPENILMD SDMEPHIGDF GLARILDDST VSTATVTGTT GYIAPENAYK TVRSKESDVY SYGVVLLELV TGKRALDRSF 1001: PEDINIVSWV RSVLSSYEDE DDTAGPIVDP KLVDELLDTK LREQAIQVTD LALRCTDKRP ENRPSMRDVV KDLTDLESFV RSTSGSVH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)