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AT4G10390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33260.1); Has 108313 Blast hits to 107330 proteins in 4134 species: Archae - 96; Bacteria - 12123; Metazoa - 38925; Fungi - 9468; Plants - 31439; Viruses - 422; Other Eukaryotes - 15840 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G10390-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187
EMBL:AL049488EMBL:AL161517EMBL:AY093195EMBL:BT000246
EMBL:CP002687EnsemblPlants:AT4G10390EnsemblPlants:AT4G10390.1entrez:826631
GeneID:826631Genevisible:Q9SV83GO:GO:0004674GO:GO:0005524
GO:GO:0009611Gramene:AT4G10390.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF91
HOGENOM:HOG000116550InParanoid:Q9SV83InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR017441iPTMnet:Q9SV83KEGG:ath:AT4G10390
OMA:YDTHEAAPaxDb:Q9SV83Pfam:PF00069Pfam:Q9SV83
Pfscan:PS50011PhylomeDB:Q9SV83PIR:T04054PRIDE:Q9SV83
PRO:PR:Q9SV83PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q9SV83Proteomes:UP000006548RefSeq:NP_192777.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9SV83STRING:3702.AT4G10390.1
SUPFAM:SSF56112TAIR:AT4G10390UniGene:At.33632UniProt:Q9SV83
Coordinates (TAIR10) chr4:-:6441949..6443161
Molecular Weight (calculated) 37788.70 Da
IEP (calculated) 7.18
GRAVY (calculated) -0.06
Length 342 amino acids
Sequence (TAIR10)
(BLAST)
001: MACFLNCVRF DVSKTITDKP TSQGSGVTCY NSWDDVETLT SNFSRLIGSG GYSSIYMARF SGSDKAALKV HVSSHRLYQV FRLELDILLR LQHPNIVKLL
101: GYFDDSEENG ALLLEYLPQG NLQEKLQSNS KQVLQWRNRV AIALQLVQAI EHIHEKCSPQ IVHGDIKSSN VLLDKNFDCK LCDFGSAKVG FSSMVQPPTM
201: SPRSRQVKMV GSPGYTDPHY LRTGIASKKM DMYGFGVVVL ELVSGKEAFS AERGEMLVHI AAPLMNEILD SSVDISEDKV RQFLDPRLLR DSLDIDEVKT
301: MLSVAAVCIS SKLSLRPSAA QVADTLIKEI PSLSFLGCGK GV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)