AT1G33260.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.910 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G10390.1); Has 103071 Blast hits to 102138 proteins in 3275 species: Archae - 132; Bacteria - 12149; Metazoa - 36115; Fungi - 8926; Plants - 30400; Viruses - 358; Other Eukaryotes - 14991 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:12064796..12066114 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38583.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.29 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 349 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSCFLSCVRF ETTTDNNKPT STESGSVSGV TCYTWDDVES LTSNFSRLIG TGGYSSIYLA RVSGSINAAL KVHVSSHRLY QVFRSELEIL LRLQHPHIVK 101: LLGYFDDSEE SGALLLEYLP QGNLQEKLNR NSKQVLPWRN RTAIAFQVAQ AIEHIHEKCS PQIVHGDIKS SNILLDKHFN SKLCDFGSAK VGFSSMVQPS 201: KTTSTMSPRS KQVMMIGSPG YTDPHYLRTG IASKKMDMYG FGVVVLELVS GKEAVSSERG EMLVHSTASL IHEILDSNGD IGEEKVRQFL DPRLSRDGSI 301: DLEEVKTMLR VAAFCLRSPP SLRPSASQVV QTLNKKIPSL SFLGCGKKE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)