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AT5G59680.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.969
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G59680-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IF1S
EMBL:AB006705EMBL:CP002688EMBL:FJ708808EnsemblPlants:AT5G59680
EnsemblPlants:AT5G59680.1entrez:836089Gene3D:2.60.120.200Gene3D:3.80.10.10
GeneID:836089Genevisible:Q9FN93GO:GO:0004674GO:GO:0005524
GO:GO:0016021Gramene:AT5G59680.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF44
HOGENOM:HOG000116550InParanoid:Q9FN93InterPro:IPR000719InterPro:IPR001611
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR024788InterPro:IPR032675KEGG:ath:AT5G59680OMA:PNPWATI
PaxDb:Q9FN93Pfam:PF00069Pfam:PF12819Pfam:PF13855
Pfam:Q9FN93Pfscan:PS50011PhylomeDB:Q9FN93PRIDE:Q9FN93
PRO:PR:Q9FN93PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q9FN93Proteomes:UP000006548RefSeq:NP_200776.2scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9FN93STRING:3702.AT5G59680.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT5G59680TMHMM:TMhelix
UniGene:At.55626UniProt:Q9FN93
Coordinates (TAIR10) chr5:+:24046792..24050801
Molecular Weight (calculated) 98374.60 Da
IEP (calculated) 7.07
GRAVY (calculated) -0.26
Length 887 amino acids
Sequence (TAIR10)
(BLAST)
001: MERSLELLLL LIRTLAIIHI SQAQSQQGFI SLDCGLPANE PSPYTEPRTG LQFSSDAAFI QSGKIGRIQA NLEADFLKPS TTMRYFPDGK RNCYNLNVEK
101: GRNHLIRARF VYGNYDGRDT GPKFDLYLGP NPWATIDLAK QVNGTRPEIM HIPTSNKLQV CLVKTGETTP LISVLEVRPM GSGTYLTKSG SLKLYYREYF
201: SKSDSSLRYP DDIYDRQWTS FFDTEWTQIN TTSDVGNSND YKPPKVALTT AAIPTNASAP LTNEWSSVNP DEQYYVYAHF SEIQELQANE TREFNMLLNG
301: KLFFGPVVPP KLAISTILSV SPNTCEGGEC NLQLIRTNRS TLPPLLNAYE VYKVIQFPQL ETNETDVSAV KNIQATYELS RINWQSDPCV PQQFMWDGLN
401: CSITDITTPP RITTLNLSSS GLTGTITAAI QNLTTLEKLD LSNNNLTGEV PEFLSNMKSL LVINLSGNDL NGTIPQSLQR KGLELLYQGN PRLISPGSTE
501: TKSGKSFPVT IVASVGSAAI LIVVLVLVLF LRKKKPSAVE VVLPRPSRPT MNVPYANSPE PSIEMKKRKF TYSEVTKMTN NFGRVVGEGG FGVVCHGTVN
601: GSEQVAVKLL SQSSTQGYKE FKAEVDLLLR VHHTNLVSLV GYCDEGDHLA LIYEFVPNGD LRQHLSGKGG KPIVNWGTRL RIAAEAALGL EYLHIGCTPP
701: MVHRDVKTTN ILLDEHYKAK LADFGLSRSF PVGGESHVST VIAGTPGYLD PEYYHTSRLS EKSDVYSFGI VLLEMITNQA VIDRNRRKSH ITQWVGSELN
801: GGDIAKIMDL KLNGDYDSRS AWRALELAMS CADPTSARRP TMSHVVIELK ECLVSENSRR NMSRGMDTLS SPEVSMIFDA EMIPRAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)