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AT3G48080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.556
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity, triglyceride lipase activity, signal transducer activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48090.1); Has 522 Blast hits to 472 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 2; Plants - 484; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVJ6eggNOG:ENOG410YEK6EMBL:AF462816EMBL:AL049658
EMBL:BT000828EMBL:CP002686EnsemblPlants:AT3G48080EnsemblPlants:AT3G48080.1
entrez:823963ESTHER:arath-T17F15.50Gene3D:3.40.50.1820GeneID:823963
Genevisible:Q9SU71GO:GO:0005634GO:GO:0005737GO:GO:0006629
GO:GO:0006952GO:GO:0016787Gramene:AT3G48080.1hmmpanther:PTHR21493
hmmpanther:PTHR21493:SF94HOGENOM:HOG000243119InParanoid:Q9SU71InterPro:IPR002921
InterPro:IPR029058KEGG:ath:AT3G48080KO:K18875ncoils:Coil
OMA:FHANVERPaxDb:Q9SU71Pfam:PF01764Pfam:Q9SU71
PhylomeDB:Q9SU71PIR:T06675PRIDE:Q9SU71PRO:PR:Q9SU71
ProteinModelPortal:Q9SU71Proteomes:UP000006548RefSeq:NP_190391.1SMR:Q9SU71
STRING:3702.AT3G48080.1SUPFAM:SSF53474TAIR:AT3G48080UniGene:At.62871
UniProt:Q9SU71
Coordinates (TAIR10) chr3:-:17753104..17755145
Molecular Weight (calculated) 71635.10 Da
IEP (calculated) 6.00
GRAVY (calculated) -0.37
Length 629 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFEALTGVN GDLVTISWMA SKGANQTEHY LKEEVGGTVF FAFRASFSSE DLFATENTSP FGEIKMKRNQ FPCMRSIGND VDTTVNEAFL KSLEVLIGPR
101: TSFHASVQSA VDRKQQVVFT GHSFGGATAI LATVWYLETY FIRDAYAAPE PRCVTFGAPL VGDYIFKHAL GRENWSRFFV NFVTRFDIVP RIMLARKTTI
201: EQTLSYVLGK LDSTRAPIHE SDQVITEFYT RVMRDTYTVA SKAVCQLIGN GEAFLETLSS FYELSPYRPV GTFVFSTQKR LVVVNNSDAI LQMLFYTCQS
301: NDEQELSVIP FLSIRDHHGY EELVQSIGIK LLNHLDLHNP LLDGENSIGS ALDDLGMSTR ARQCIHAALE AEKQRVENQK KIETKRDQIV ERLTWIVEVY
401: KPKCQAHKNG YYDSFKDSNE ENDFKANVKR VELAGIFDEV LGLVKKGQLP DGFEGSRGWI NLATQYRRLI EPLDISNYHG QLKNEDTGPY MLHGRPSRYK
501: YAQRGYEHDI LKPTGMIAKD VFWSKVNGLN LGLQQDIQEI LKNSGSECGS CFWAEVEELK GKPYEEVQVR FKTLEGLLEG WIKDGEVDEK EIFLEGSTFR
601: KWWNTLPDSH KIHAPLYPRE RMMDETRAT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)