AT4G37250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G23300.1); Has 127505 Blast hits to 87004 proteins in 3796 species: Archae - 113; Bacteria - 9564; Metazoa - 32249; Fungi - 5071; Plants - 68196; Viruses - 226; Other Eukaryotes - 12086 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17527789..17530191 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84067.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.09 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 768 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN 101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP 201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI 301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR 401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG 501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER 601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH 701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)