AT5G62230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ERECTA-like 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ERECTA-like 1 (ERL1); FUNCTIONS IN: kinase activity; INVOLVED IN: stomatal complex morphogenesis, embryo sac development, ovule development; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ERECTA-like 2 (TAIR:AT5G07180.1); Has 222426 Blast hits to 137934 proteins in 3754 species: Archae - 152; Bacteria - 22676; Metazoa - 73214; Fungi - 10790; Plants - 88135; Viruses - 480; Other Eukaryotes - 26979 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24996433..25002130 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 106493.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.08 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.04 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 966 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKEKMQRMVL SLAMVGFMVF GVASAMNNEG KALMAIKGSF SNLVNMLLDW DDVHNSDLCS WRGVFCDNVS YSVVSLNLSS LNLGGEISPA IGDLRNLQSI 101: DLQGNKLAGQ IPDEIGNCAS LVYLDLSENL LYGDIPFSIS KLKQLETLNL KNNQLTGPVP ATLTQIPNLK RLDLAGNHLT GEISRLLYWN EVLQYLGLRG 201: NMLTGTLSSD MCQLTGLWYF DVRGNNLTGT IPESIGNCTS FQILDISYNQ ITGEIPYNIG FLQVATLSLQ GNRLTGRIPE VIGLMQALAV LDLSDNELVG 301: PIPPILGNLS FTGKLYLHGN MLTGPIPSEL GNMSRLSYLQ LNDNKLVGTI PPELGKLEQL FELNLANNRL VGPIPSNISS CAALNQFNVH GNLLSGSIPL 401: AFRNLGSLTY LNLSSNNFKG KIPVELGHII NLDKLDLSGN NFSGSIPLTL GDLEHLLILN LSRNHLSGQL PAEFGNLRSI QMIDVSFNLL SGVIPTELGQ 501: LQNLNSLILN NNKLHGKIPD QLTNCFTLVN LNVSFNNLSG IVPPMKNFSR FAPASFVGNP YLCGNWVGSI CGPLPKSRVF SRGALICIVL GVITLLCMIF 601: LAVYKSMQQK KILQGSSKQA EGLTKLVILH MDMAIHTFDD IMRVTENLNE KFIIGYGASS TVYKCALKSS RPIAIKRLYN QYPHNLREFE TELETIGSIR 701: HRNIVSLHGY ALSPTGNLLF YDYMENGSLW DLLHGSLKKV KLDWETRLKI AVGAAQGLAY LHHDCTPRII HRDIKSSNIL LDENFEAHLS DFGIAKSIPA 801: SKTHASTYVL GTIGYIDPEY ARTSRINEKS DIYSFGIVLL ELLTGKKAVD NEANLHQLIL SKADDNTVME AVDPEVTVTC MDLGHIRKTF QLALLCTKRN 901: PLERPTMLEV SRVLLSLVPS LQVAKKLPSL DHSTKKLQQE NEVRNPDAEA SQWFVQFREV ISKSSI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)