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AT1G02800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cellulase 2
Curator
Summary (TAIR10)
Encodes a protein with similarity to endo-1,4-b-glucanases and is a member of Glycoside Hydrolase Family 9. CEL2 is induced by nemotodes and is expressed in syncitia induced by Heterodera schachtii.May be involved in the development and function of syncitia.
Computational
Description (TAIR10)
cellulase 2 (CEL2); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to nematode, pattern specification process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has 1817 Blast hits to 1800 proteins in 268 species: Archae - 2; Bacteria - 651; Metazoa - 181; Fungi - 17; Plants - 925; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G02800-MONOMERCAZy:GH9EC:3.2.1.4eggNOG:ENOG410IGUD
eggNOG:ENOG410XPC9EMBL:AC009525EMBL:AF034573EMBL:AK228979
EMBL:CP002684EnsemblPlants:AT1G02800EnsemblPlants:AT1G02800.1entrez:839385
Gene3D:1.50.10.10GeneID:839385Genevisible:Q9SRX3GO:GO:0005576
GO:GO:0007389GO:GO:0008810GO:GO:0009624GO:GO:0030245
GO:GO:0071555Gramene:AT1G02800.1gramene_pathway:3.2.1.4gramene_pathway:PWY-1001
hmmpanther:PTHR22298hmmpanther:PTHR22298:SF55HOGENOM:HOG000021033InParanoid:Q9SRX3
InterPro:IPR001701InterPro:IPR008928InterPro:IPR012341InterPro:IPR018221
InterPro:IPR033126KEGG:00500+3.2.1.4KEGG:ath:AT1G02800OMA:EEYKEHA
PaxDb:Q9SRX3Pfam:PF00759Pfam:Q9SRX3PhylomeDB:Q9SRX3
PIR:A86158PIR:T52135PRIDE:Q9SRX3PRO:PR:Q9SRX3
PROSITE:PS00592PROSITE:PS00698ProteinModelPortal:Q9SRX3Proteomes:UP000006548
RefSeq:NP_171779.1scanprosite:PS00592scanprosite:PS00698SMR:Q9SRX3
STRING:3702.AT1G02800.1SUPFAM:SSF48208TAIR:AT1G02800tair10-symbols:ATCEL2
tair10-symbols:CEL2UniGene:At.10575UniProt:Q9SRX3
Coordinates (TAIR10) chr1:-:613386..616103
Molecular Weight (calculated) 55421.70 Da
IEP (calculated) 8.06
GRAVY (calculated) -0.25
Length 501 amino acids
Sequence (TAIR10)
(BLAST)
001: MALYLSSSRL ITFLSFILLL SNGFSSSSSR PSIHHRHHLD NHNYKDALSK SILFFEGQRS GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF
101: GFPMAFTTTM LSWSLIEFGG LMKSELPNAK DAIRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD KNNPGSDIAG EIAAALAAAS
201: IVFRKCDPSY SNHLLQRAIT VFTFADKYRG PYSAGLAPEV CPFYCSYSGY QDELLWGAAW LQKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR
301: ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYLL
401: GGNPLKMSYM VGYGLKYPRR IHHRGSSLPS VAVHPTRIQC HDGFSLFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR SEPATYINAP LVGALAYLAR
501: S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)