suba logo
AT1G11600.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 77, subfamily B, polypeptide 1
Curator
Summary (TAIR10)
member of CYP77B
Computational
Description (TAIR10)
cytochrome P450, family 77, subfamily B, polypeptide 1 (CYP77B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 77, subfamily A, polypeptide 9 (TAIR:AT5G04630.1); Has 32592 Blast hits to 32103 proteins in 1633 species: Archae - 48; Bacteria - 3170; Metazoa - 12143; Fungi - 6852; Plants - 9226; Viruses - 3; Other Eukaryotes - 1150 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G11600-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:AC007296
EMBL:AK229331EMBL:AY084787EMBL:CP002684EnsemblPlants:AT1G11600
EnsemblPlants:AT1G11600.1entrez:837704Gene3D:1.10.630.10GeneID:837704
GO:GO:0005506GO:GO:0005886GO:GO:0016709GO:GO:0020037
GO:GO:0044550Gramene:AT1G11600.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF54
HOGENOM:HOG000218630InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT1G11600KO:K00517OMA:NSAEYGSPfam:PF00067
PhylomeDB:Q9SAB7PIR:D86249PRINTS:PR00385PRINTS:PR00463
PROSITE:PS00086Proteomes:UP000006548RefSeq:NP_172626.1scanprosite:PS00086
SMR:Q9SAB7STRING:3702.AT1G11600.1SUPFAM:SSF48264TAIR:AT1G11600
tair10-symbols:CYP77B1UniGene:At.42120UniProt:Q9SAB7
Coordinates (TAIR10) chr1:+:3902090..3903622
Molecular Weight (calculated) 58044.80 Da
IEP (calculated) 8.40
GRAVY (calculated) -0.08
Length 510 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLTDVIIFL FALYFINLWW RRYFSAGSSQ CSLNIPPGPK GWPLVGNLLQ VIFQRRHFVF LMRDLRKKYG PIFTMQMGQR TMIIITDEKL IHEALVQRGP
101: TFASRPPDSP IRLMFSVGKC AINSAEYGSL WRTLRRNFVT ELVTAPRVKQ CSWIRSWAMQ NHMKRIKTEN VEKGFVEVMS QCRLTICSIL ICLCFGAKIS
201: EEKIKNIENV LKDVMLITSP TLPDFLPVFT PLFRRQVREA RELRKTQLEC LVPLIRNRRK FVDAKENPNE EMVSPIGAAY VDSLFRLNLI ERGGELGDEE
301: IVTLCSEIVS AGTDTSATTL EWALFHLVTD QNIQEKLYEE VVGVVGKNGV VEEDDVAKMP YLEAIVKETL RRHPPGHFLL SHAAVKDTEL GGYDIPAGAY
401: VEIYTAWVTE NPDIWSDPGK FRPERFLTGG DGVDADWTGT RGVTMLPFGA GRRICPAWSL GILHINLMLA RMIHSFKWIP VPDSPPDPTE TYAFTVVMKN
501: SLKAQIRSRT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)