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AT4G29030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Putative membrane lipoprotein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; Has 83209 Blast hits to 19401 proteins in 1362 species: Archae - 122; Bacteria - 36227; Metazoa - 23555; Fungi - 3961; Plants - 7492; Viruses - 888; Other Eukaryotes - 10964 (source: NCBI BLink).
Protein Annotations
EMBL:AL078470EMBL:AL161574EMBL:AY086224EMBL:CP002687
EnsemblPlants:AT4G29030EnsemblPlants:AT4G29030.1entrez:829024GeneID:829024
Gramene:AT4G29030.1hmmpanther:PTHR34463KEGG:ath:AT4G29030OMA:QKNYLGY
Pfscan:PS51257PIR:T08958Proteomes:UP000006548RefSeq:NP_194632.1
STRING:3702.AT4G29030.1TAIR:AT4G29030TMHMM:TMhelixUniGene:At.3405
UniProt:Q9SZD3
Coordinates (TAIR10) chr4:+:14307328..14307675
Molecular Weight (calculated) 10304.10 Da
IEP (calculated) 8.47
GRAVY (calculated) 0.36
Length 115 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKWFFTIFL VFALASALAC GARNVPVGLS DQKNYLGYGG GYSGVGDNGL PFGGVGGGVS GPGGNLGYGG FGGAGGGLGG GLGGGAGSGL GGGLGGGSGI
101: GAGTSGGSTG GVHFP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)