AT5G44620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.994 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 706, subfamily A, polypeptide 3 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP706A | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 706, subfamily A, polypeptide 3 (CYP706A3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 7 (TAIR:AT4G12330.1); Has 33089 Blast hits to 32842 proteins in 1651 species: Archae - 49; Bacteria - 3457; Metazoa - 11836; Fungi - 7066; Plants - 9402; Viruses - 3; Other Eukaryotes - 1276 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:17997908..17999539 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59381.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.85 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 519 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTDISSLFRN RSRKDQLDYG LTVIVISTLC WCLWLYAKCK RRSPPLPPGP WGLPIIGNLP FLQPELHTYF QGLAKKHGPI FKLWLGAKLT IVVTSSEVAQ 101: EILKTNDIIF ANHDVPAVGP VNTYGGTEII WSPYGPKWRM LRKLCVNRIL RNAMLDSSTD LRRRETRQTV RYLADQARVG SPVNLGEQIF LMMLNVVTQM 201: LWGTTVKEEE REVVGAEFLE VIREMNDLLL VPNISDFFPV LSRFDLQGLA KRMRRPAQRM DQMFDRIINQ RLGMDRDSSD GRAVDFLDVL LKVKDEEAEK 301: TKLTMNDVKA VLMDMVLGGT DTSLHVIEFA MAELLHNPDI MKRAQQEVDK VVGKEKVVEE SHISKLPYIL AIMKETLRLH TVAPLLVPRR PSQTTVVGGF 401: TIPKDSKIFI NAWAIHRNPN VWENPLKFDP DRFLDMSYDF KGNDFNYLPF GSGRRICVGM AMGERVVLYN LATFLHSFDW KIPQGERVEV EEKFGIVLEL 501: KNPLVATPVL RLSDPNLYL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)