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AT5G44630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Terpenoid cyclases/Protein prenyltransferases superfamily protein
Curator
Summary (TAIR10)
Encodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries.
Computational
Description (TAIR10)
Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: sesquiterpene biosynthetic process, sesquiterpenoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpenoid synthase 13 (TAIR:AT4G13300.1); Has 1689 Blast hits to 1665 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1685; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G44630-MONOMERBioCyc:MetaCyc:AT5G44630-MONOMERBRENDA:4.2.3.69BRENDA:4.2.3.78
BRENDA:4.2.3.79EC:4.2.3.69EC:4.2.3.78EC:4.2.3.79
eggNOG:ENOG410JVXXeggNOG:ENOG41105GBEMBL:AB024024EMBL:AY876386
EMBL:BT030324EMBL:CP002688EnsemblPlants:AT5G44630EnsemblPlants:AT5G44630.1
entrez:834491Gene3D:1.10.600.10Gene3D:1.50.30.10GeneID:834491
Genevisible:Q4KSH9GO:GO:0000287GO:GO:0005737GO:GO:0009506
GO:GO:0010333GO:GO:0016106GO:GO:0051762Gramene:AT5G44630.1
gramene_pathway:4.2.3.-gramene_pathway:PWY-5725hmmpanther:PTHR31045hmmpanther:PTHR31045:SF4
HOGENOM:HOG000232971InParanoid:Q4KSH9InterPro:IPR001906InterPro:IPR005630
InterPro:IPR008930InterPro:IPR008949iPTMnet:Q4KSH9KEGG:ath:AT5G44630
KO:K15799ncoils:CoilOMA:YATIACSPaxDb:Q4KSH9
Pfam:PF01397Pfam:PF03936Pfam:Q4KSH9PhylomeDB:Q4KSH9
PRIDE:Q4KSH9PRO:PR:Q4KSH9ProteinModelPortal:Q4KSH9Proteomes:UP000006548
RefSeq:NP_199276.1SABIO-RK:Q4KSH9SMR:Q4KSH9STRING:3702.AT5G44630.1
SUPFAM:SSF48239SUPFAM:SSF48576TAIR:AT5G44630UniGene:At.22345
UniPathway:UPA00213UniProt:Q4KSH9
Coordinates (TAIR10) chr5:+:18003280..18005616
Molecular Weight (calculated) 64912.80 Da
IEP (calculated) 5.07
GRAVY (calculated) -0.32
Length 557 amino acids
Sequence (TAIR10)
(BLAST)
001: MEALGNFDYE SYTNFTKLPS SQWGDQFLKF SIADSDFDVL EREIEVLKPK VRENIFVSSS TDKDAMKKTI LSIHFLDSLG LSYHFEKEIE ESLKHAFEKI
101: EDLIADENKL HTISTIFRVF RTYGYYMSSD VFKIFKGDDG KFKESLIEDV KGMLSFYEAV HFGTTTDHIL DEALSFTLNH LESLATGRRA SPPHISKLIQ
201: NALHIPQHRN IQALVAREYI SFYEHEEDHD ETLLKLAKLN FKFLQLHYFQ ELKTITMWWT KLDHTSNLPP NFRERTVETW FAALMMYFEP QFSLGRIMSA
301: KLYLVITFLD DACDTYGSIS EVESLADCLE RWDPDYMENL QGHMKTAFKF VMYLFKEYEE ILRSQGRSFV LEKMIEEFKI IARKNLELVK WARGGHVPSF
401: DEYIESGGAE IGTYATIACS IMGLGEIGKK EAFEWLISRP KLVRILGAKT RLMDDIADFE EDMEKGYTAN ALNYYMNEHG VTKEEASREL EKMNGDMNKI
501: VNEECLKITT MPRRILMQSV NYARSLDVLY TADDVYNHRE GKLKEYMRLL LVDPILL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)