AT2G27060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 117505 Blast hits to 68268 proteins in 2350 species: Archae - 92; Bacteria - 11270; Metazoa - 27205; Fungi - 2913; Plants - 66366; Viruses - 137; Other Eukaryotes - 9522 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:11551288..11554577 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 110317.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.27 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1020 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MQIICSMIFL LVMMVMKVSG FSDFEALLEL KKGFQGDPSR KVLTSWDAKA LSSDRCPLNW YGVTCSSGGV TSIDLNGFGL LGSFSFPVIV GLRMLQNLSI 0101: ANNQFSGTLS NIGSLTSLKY LDVSGNLFHG ALPSGIENLR NLEFVNLSGN NNLGGVIPSG FGSLAKLKYL DLQGNSFSGE VMSLFSQLIS VEYVDISRNN 0201: FSGSLDLGLA KSSFVSSIRH LNVSGNSLVG ELFAHDGIPF FDSLEVFDAS SNQLSGSVPV FSFVVSLKIL RLQDNQLSAS LPPGLLQESS TILTDLDLSL 0301: NQLEGPIGSI TSSTLEKLNL SSNRLSGSLP LKVGHCAIID LSNNKISGEL SRIQNWGDSV EIIRLSSNSL TGTLPGQTSQ FLRLTSLKAA NNSLQGVLPF 0401: ILGTYPELKE IDLSHNQLSG VIPSNLFISA KLTELNLSNN NFSGSLPLQD ASTVGNLSLT NIGLSHNSLG GVLSEELTRF HNLISLDLSY NNFEGNIPDG 0501: LPDSLKMFTV SANNLSGNVP ENLRRFPDSA FHPGNALLNV PISLPKDKTD ITLRKHGYHM KTSVKAALII GLVVGTALLA LVCVMFHFML RKQHDEEKSD 0601: VTGEKSIVPK TEPSSSNVIA AKNSVQENES SSSTTSTPSI KAKLPVSSSR FSQYSDSENS SPFLKEPNEE LHSESRKDEI LSSQVSSSTP SLPKIQNSPD 0701: NPTSRQTSMR LDGNLYIFDS SLKLTAEELS RAPAEAIGRS CHGTLYRAVL NSDSVLAVKW LREGTAKGKK EFAREIKKLG NINHPNLVSL QAYYWGPKEH 0801: EKLIISRYMD APCLAFYLQE AGQLNLPPLL LENRLKITLD IASCLSYLHN GEAIPHGNLK STNVLLKPPE LTAHLTDYSL HRLITPEATS EQVLNAAALG 0901: YCPPEFASSS KPYPSLKSDV YAFGVILLEL LTGKVSGDIV CSDPGVVELT EWVLLLVGQN RATECFDPSI VGSQGSRNPF GVLTDVLQVA LSCISPAPER 1001: PDMKLVSQEL SRIVLKRTAI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)