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AT5G02760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23832523 (2014): nucleus nuclear matrix
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G12620.2); Has 5768 Blast hits to 5765 proteins in 291 species: Archae - 2; Bacteria - 14; Metazoa - 1526; Fungi - 593; Plants - 2621; Viruses - 2; Other Eukaryotes - 1010 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G02760-MONOMERBioGrid:16512EC:3.1.3.16eggNOG:COG0631
eggNOG:KOG0700EMBL:AL162973EMBL:BT022008EMBL:BT023482
EMBL:CP002688EnsemblPlants:AT5G02760EnsemblPlants:AT5G02760.1entrez:831234
Gene3D:3.60.40.10GeneID:831234Genevisible:Q501F9GO:GO:0004722
GO:GO:0005737GO:GO:0016791GO:GO:0046872GO:GO:1900056
Gramene:AT5G02760.1hmmpanther:PTHR13832hmmpanther:PTHR13832:SF367HOGENOM:HOG000238703
InParanoid:Q501F9InterPro:IPR000222InterPro:IPR001932InterPro:IPR015655
KEGG:ath:AT5G02760OMA:MVKPCWRPANTHER:PTHR13832PaxDb:Q501F9
Pfam:PF00481Pfam:Q501F9Pfscan:PS51746PhylomeDB:Q501F9
PIR:T48297PRIDE:Q501F9PRO:PR:Q501F9PROSITE:PS01032
PROSITE:PS51746ProteinModelPortal:Q501F9Proteomes:UP000006548RefSeq:NP_195896.2
scanprosite:PS01032SMART:SM00331SMART:SM00332SMR:Q501F9
STRING:3702.AT5G02760.1SUPFAM:SSF81606TAIR:AT5G02760UniGene:At.23648
UniGene:At.69718UniProt:Q501F9
Coordinates (TAIR10) chr5:+:625377..626817
Molecular Weight (calculated) 41336.60 Da
IEP (calculated) 9.15
GRAVY (calculated) -0.33
Length 370 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKPCWRIGA GMERSKINPT KVDGLTWYKD LGLHTFGEFS MAMIQANSVM EDQCQIESGP LTFNNPTVQG TFVGVYDGHG GPEASRFIAD NIFPKLKKFA
101: SEGREISEQV ISKAFAETDK DFLKTVTKQW PTNPQMASVG SCCLAGVICN GLVYIANTGD SRAVLGRSER GGVRAVQLSV EHNANLESAR QELWSLHPND
201: PTILVMKHRL WRVKGVIQVT RSIGDAYLKR AEFNREPLLP KFRLPEHFTK PILSADPSVT ITRLSPQDEF IILASDGLWE HLSNQEAVDI VHNSPRQGIA
301: RRLLKAALKE AAKKREMRYS DLTEIHPGVR RHFHDDITVI VVYLNPHPVK TNSWASPLSI RGGYPMHSTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)