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AT1G51800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51860.1); Has 161787 Blast hits to 121896 proteins in 4448 species: Archae - 101; Bacteria - 13971; Metazoa - 43453; Fungi - 9805; Plants - 75517; Viruses - 389; Other Eukaryotes - 18551 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G51800-MONOMEReggNOG:COG0515eggNOG:ENOG410IID2EMBL:AC025294
EMBL:CP002684EMBL:FJ708650EnsemblPlants:AT1G51800EnsemblPlants:AT1G51800.1
entrez:841606Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:841606
GO:GO:0004674GO:GO:0005524GO:GO:0009788GO:GO:0016021
GO:GO:0050832GO:GO:0090406Gramene:AT1G51800.1hmmpanther:PTHR27003
hmmpanther:PTHR27003:SF44InterPro:IPR000719InterPro:IPR001245InterPro:IPR001611
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR024788InterPro:IPR032675KEGG:ath:AT1G51800OMA:LANLRSW
Pfam:PF07714Pfam:PF12819Pfam:PF13855Pfscan:PS50011
PhylomeDB:Q9C8I6PIR:B96557PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_175591.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9C8I6STRING:3702.AT1G51800.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G51800TMHMM:TMhelix
UniGene:At.37745UniProt:Q9C8I6
Coordinates (TAIR10) chr1:+:19214203..19217833
Molecular Weight (calculated) 99644.30 Da
IEP (calculated) 6.07
GRAVY (calculated) -0.18
Length 894 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFSSCFLLV LLQIFSALLL CLAQDQSGFI SLDCGSPRET SFREKTTNIT YISDANFINT GVGGSIKQGY RTQFQQQTWN LRSFPQGIRN CYTLNLTIGD
101: EYLIRANFLH GGYDDKPSTQ FELYLGPNLW STVTTTNETE ASIFEMIHIL TTDRLQICLV KTGNATPFIS ALELRKLMNT TYLTRQGSLQ TFIRADVGAT
201: VNQGYRYGID VFDRVWTPYN FGNWSQISTN QSVNINNDYQ PPEIAMVTAS VPTDPDAAMN ISLVGVERTV QFYVFMHFAE IQELKSNDTR EFNIMYNNKH
301: IYGPFRPLNF TTSSVFTPTE VVADANGQYI FSLQRTGNST LPPLLNAMEI YSVNLLPQQE TDRKEVDAMM NIKSAYGVNK IDWEGDPCVP LDYKWSGVNC
401: TYVDNETPKI ISLDLSTSGL TGEILEFISD LTSLEVLDLS NNSLTGSVPE FLANMETLKL INLSGNELNG SIPATLLDKE RRGSITLSIE GNTGLCSSTS
501: CATTKKKKKN TVIAPVAASL VSVFLIGAGI VTFLILKRKK RTKLGLNPNS GTGTTPLHSR SHHGFEPPVI AKNRKLTYID VVKITNNFER VLGRGGFGVV
601: YYGVLNNEPV AVKMLTESTA LGYKQFKAEV ELLLRVHHKD LTCLVGYCEE GDKMSLIYEF MANGDLKEHL SGKRGPSILT WEGRLRIAAE SAQGLEYLHN
701: GCKPQIVHRD IKTTNILLNE KFQAKLADFG LSRSFPLGTE THVSTIVAGT PGYLDPEYYR TNWLTEKSDV FSFGVVLLEL VTNQPVIDMK REKSHIAEWV
801: GLMLSRGDIN SIVDPKLQGD FDPNTIWKVV ETAMTCLNPS SSRRPTMTQV VMDLKECLNM EMARNMGSRM TDSTNDSSIE LSMNFTTELN PGAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)