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AT1G79630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G16220.1); Has 5543 Blast hits to 5523 proteins in 290 species: Archae - 2; Bacteria - 8; Metazoa - 1342; Fungi - 594; Plants - 2451; Viruses - 5; Other Eukaryotes - 1141 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G79630-MONOMERBioCyc:ARA:GQT-2197-MONOMERBioCyc:ARA:GQT-2198-MONOMERBioGrid:29520
EC:3.1.3.16eggNOG:COG0631eggNOG:KOG0698EMBL:AC010793
EMBL:AY080600EMBL:AY114037EMBL:BX814900EMBL:CP002684
EnsemblPlants:AT1G79630EnsemblPlants:AT1G79630.1entrez:844302Gene3D:3.60.40.10
GeneID:844302Genevisible:Q8RXZ4GO:GO:0004722GO:GO:0046872
hmmpanther:PTHR13832hmmpanther:PTHR13832:SF286HOGENOM:HOG000233897InParanoid:Q8RXZ4
IntAct:Q8RXZ4InterPro:IPR001932InterPro:IPR015655KEGG:ath:AT1G79630
MINT:MINT-8390527ncoils:CoilOMA:MTLAECIPANTHER:PTHR13832
PaxDb:Q8RXZ4Pfam:PF00481Pfam:Q8RXZ4Pfscan:PS51746
PhylomeDB:Q8RXZ4PIR:E96827PRIDE:Q8RXZ4PRO:PR:Q8RXZ4
PROSITE:PS51746ProteinModelPortal:Q8RXZ4Proteomes:UP000006548RefSeq:NP_001031302.1
RefSeq:NP_178081.2RefSeq:NP_974180.1SMART:SM00332SMR:Q8RXZ4
STRING:3702.AT1G79630.1SUPFAM:SSF81606TAIR:AT1G79630UniGene:At.44013
UniProt:Q8RXZ4
Coordinates (TAIR10) chr1:-:29962931..29965169
Molecular Weight (calculated) 55606.70 Da
IEP (calculated) 4.51
GRAVY (calculated) -0.38
Length 504 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLCYSVDRT TGKEPGEASS TATTAETVEE RSGSGRWRRP RDLKGGGDIE GIPQVLGRLV SNGSSKIACL YTQQGKKGTN QDAMLVFENF CSRDDTVFCG
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)