AT3G46280.1::SUBA5

AT3G46280.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plasma membrane 1.000
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31541795 (2020): plasma membrane PMID:26781341 (2016): plasma membrane PMID:22318864 (2012): plasma membrane	PMID:24833385 (2014): AT5G06320.1:None: PMID:24833385 (2014): AT4G30850.1:None: PMID:24833385 (2014): AT4G37680.1:None: PMID:24833385 (2014): AT3G17000.1:None: PMID:24833385 (2014): AT1G17280.1:None: PMID:24833385 (2014): AT2G41705.1:None: PMID:24833385 (2014): AT3G12180.1:None: PMID:24833385 (2014): AT2G26180.1:None: PMID:24833385 (2014): AT1G34640.1:None: PMID:24833385 (2014): AT3G66654.1:None: PMID:24833385 (2014): AT5G49540.1:None: PMID:24833385 (2014): AT3G48040.1:None: PMID:24833385 (2014): AT4G14455.1:None: PMID:24833385 (2014): AT1G47640.1:None: PMID:24833385 (2014): AT3G13175.1:None: PMID:24833385 (2014): AT5G52420.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT1G51850.1 plasma membrane [12.41]
AT1G51800.1 plasma membrane [9.58]
AT2G44370.1 nucleus [9.25]
AT2G39530.1 extracellular [8.97]
AT2G39200.1 plasma membrane [7.75]
AT1G51790.1 plasma membrane [7.53]
AT5G48430.1 extracellular [6.6]
AT2G19190.1 plasma membrane [6.6]
AT2G27660.1 nucleus [6.34]
AT4G22470.1 extracellular [6.23]

AT1G47640.1 endoplasmic reticulum
AT3G12180.1 endoplasmic reticulum
AT3G13175.1 endoplasmic reticulum
AT3G17000.1 endoplasmic reticulum
AT5G52420.1 endoplasmic reticulum
AT1G34640.1 extracellular
AT1G17280.1 golgi
AT3G66654.1 golgi
AT4G14455.1 golgi
AT4G30850.1 golgi
AT4G37680.1 golgi
AT2G26180.1 nucleus
AT2G41705.1 plasma membrane
AT3G48040.1 plasma membrane
AT5G06320.1 plasma membrane
AT5G49540.1 vacuole

Description (TAIR10)

protein_coding : protein kinase-related

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

protein kinase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: receptor protein kinase-related (TAIR:AT3G46270.1); Has 639 Blast hits to 634 proteins in 40 species: Archae - 0; Bacteria - 5; Metazoa - 5; Fungi - 8; Plants - 619; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IK43	eggNOG:ENOG410YADS	EMBL:AK117613	EMBL:CP002686
EnsemblPlants:AT3G46280	EnsemblPlants:AT3G46280.1	entrez:823773	GeneID:823773
GO:GO:0016021	GO:GO:0016301	Gramene:AT3G46280.1	hmmpanther:PTHR11795
hmmpanther:PTHR11795:SF392	HOGENOM:HOG000140921	InterPro:IPR024788	KEGG:ath:AT3G46280
OMA:YYENYDG	Pfam:PF12819	PhylomeDB:Q8GYH9	Proteomes:UP000006548
RefSeq:NP_190213.2	STRING:3702.AT3G46280.1	TAIR:AT3G46280	TMHMM:TMhelix
UniGene:At.43242	UniProt:Q8GYH9

Coordinates (TAIR10)

chr3:-:17005672..17008410

Molecular Weight (calculated)

50506.50 Da

IEP (calculated)

4.75

GRAVY (calculated)

-0.16

Length

471 amino acids

Sequence (TAIR10)
(BLAST)

001: MMEALLYVIT LFSLSALTVT LGESISIDCG STGSYVDSNN VTWVGDKGFV TNGEPMKIPD VVKKPINTLR YFPTGQTNCY TNIPVTKGQK TLVRTKFYYE
101: NYDAKFSPPS FDVIYDGKHR DSIVITESLL NDEETFYFSE VIYVPENKNI SVCLLRTSPS DNPFISSIEV YSLDTGMYDD LGPNEGLILH DRIAYGAKEL
201: ISYPLDPYGR VWLALGSQDS TLTDLTTSAP SIDITGASNK PPEIVMSKAL SGVGLVLSDQ TLPLTGVPVY LVLYFSEPQS LGRTQRRSFN VFLDNTQVGS
301: RPIVPVFGKA TQFILRDVVA TSASQIVFQS TDDSVLPPLI NGLELYSISN TSPDSGGGGG DQGGGSTDDS EGSGGAKQAK NLGKGGAKSS GGKKNNKLPL
401: ILGVTFASAF AVLASAFAAI WKKRQNAKSQ SNSTVPNTST EHGTGTGMSP LVGQQFASDM TDSYVVEDGH H