AT2G41705.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : camphor resistance CrcB family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
camphor resistance CrcB family protein; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Camphor resistance CrcB protein (InterPro:IPR003691); Has 1590 Blast hits to 1588 proteins in 699 species: Archae - 22; Bacteria - 1262; Metazoa - 2; Fungi - 87; Plants - 37; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:17398083..17399910 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50475.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.53 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.22 | ||||||||||||||||||||||||||||||||
| Length | 461 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDTGQSSIEP YQAKSFSRES SVASSLSLSR SLPHLIDNDV DSESVSEAGD IGDRSLRRRH SAGRSSRLSA DDFIEQGTHD TSRQEQDILH DLRAFNTASV 101: NKTLPEDITA SPLPTKSLLS PEINNSGKEE ERVLPKSLEY ISCLIHLAVF GIFGAITRYL LQKLFGPTGA RVTSDGSILY LDLPSNMVGS FLMGWFGVVF 201: KADIARVSEF VAIGLSTGYL GSLTTFSGWN QKMLDLSADG QWVYAVLGFL LGLFLTSYSI ILGVETAKGF KWLLHRRASS EDKFHCLKVN TFQSHIVSLT 301: LMLLLLVALL TASSILLVKE FDKGTSEAQL WFGCLVAAPG VWLRWFLARL NGRGLGKDSQ NLRWVPFGTL IANVVAACVM AALATLKKSV NTRTCNTVAS 401: SIQFGLLGCL STVSTFMAEF NAMRESDYPW RAYAYASFTI VVSFAIGTII YSVPVWVIGF S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)