AT4G03410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT1G52870.2); Has 1387 Blast hits to 1385 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 328; Plants - 324; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:1501907..1503486 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36175.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.42 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||||||||||||||||||
| Length | 317 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAALCCCPTT IIVSGKVSSR IKTAGPLPRI NPFKNQKRLI TERRNLIVKS IIEDREAIDV KNDNFKAEEE LSEDKVEDTD RLMSRGINAA IVLAAGTVAV 101: TKLLTIDHDY WQGWTLYEIL RYAPEHNWFA YEQILKTNPV LAKMAISGIV YSLGDWIAQC YEGKPLFEFD RTRVLRSGLV GFTLHGSLSH YYYQFCEALF 201: PFQEWWVVPA KVAFDQTVWS AIWNSIYFTV LGLLRFQSPA DIFSEIKTTF LPMLTAGWKL WPLAHLVTYG VIPVDQRLLW VDCIELIWVT ILSTYSNEKA 301: EAQASEETNS SSHSSED |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)