AT3G07700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 10121 Blast hits to 10057 proteins in 1795 species: Archae - 124; Bacteria - 4381; Metazoa - 447; Fungi - 487; Plants - 723; Viruses - 14; Other Eukaryotes - 3945 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2459696..2463241 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78283.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.50 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||
| Length | 695 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAALLASQSC CYGGETARVT KAIGFSSSLE NHFTGEATQC YGSKSKRFRI EMRQSELPSK VGINGRSVKM VPASEVVKRK DGVNGSAGKG VNGASLVSSR 101: NINGAASTLV KAPKKTTESY LPPPVEGVRV LPSDEGFSWA DENYSSLQRS IDVWSFVISL RIRILFDNSK WAYVGGFTEE KQKSRRRETA SWLRESVLQL 201: GPTFIKLGQL SSTRSDLFPR EFVDELSKLQ DRVPAFSPEK AKRFIEAELG APISVMYKEF EEQPIAAASL GQVHRAVLHN GEKVVVKVQR PGLKKLFDID 301: LRNLKLIAEY FQKSESFGTN DWVGIYEECA LILYQEIDYI NEAKNADRFR RDFRNINWVR VPLVYWDYSA MKVLTLEYVP GVKINNLDAL AARGFNRSRI 401: ASRAIEAYLI QILKTGFFHA DPHPGNLAID VDESIIYYDF GMMGEIKTFT RKRLLDLFYS VYEKDAKKVM QNLIDLEALQ PTGDLSSVRR SVQFFLDNLL 501: SQSPDQQQTL AAIGEDLFAI SQDQPFRFPS TFTFVIRAFS TLEGIGYILD PEFSFVKVAA PYAQELLDLK QRQRSGTQLV QEIRKQADDA RSSTLSMPYR 601: VQRIEEFVKE LDSGDLKLRV RVLESERAAR KATILQMATM YTVLGGTLLN IGVTFSNQGS QLVANGSFIG AGIFMLLVLR SMQRVNKLDK FEKMI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)