AT3G24190.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10148 Blast hits to 10096 proteins in 1818 species: Archae - 124; Bacteria - 4457; Metazoa - 440; Fungi - 485; Plants - 717; Viruses - 16; Other Eukaryotes - 3909 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:8743319..8747703 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 87441.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.18 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||||||||||||||||||||||||||||||
| Length | 793 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEAAVPRLVN CGPEPIRFSV SSRRSFVSGI PHRNKRSRQI LAVATDPKPT QTSPPKSTTV NGSSSPSSAS KVVNNNVSTR INDVSKEIKR VRAQMEEDEQ 101: LSVLMRGLRG QNLKDSVFAD DNIQLRLVET GESSEFLPLV YDPETISAYW GKRPRAVASR VIQLLSVAGG FLSRIAGDVI NKKVKENEVA RAIELREIVT 201: SLGPAYIKLG QALSIRPDIL SPAAMTELQK LCDKVPSYPD DVAMALIEEE LGKPWYDVYS ELSPSPIAAA SLGQVYKGRL KENGDLVAVK VQRPFVLETV 301: TVDLFVIRNL GLFLRKFPQV SVDVVGLVDE WAARFFEELD YVNEGENGTY FAEMMKKDLP QVVVPKTYQK YTSRKVLTTS WIDGEKLSQS IESDVGELVN 401: VGVICYLKQL LDTGFFHADP HPGNMIRTPD GKLAILDFGL VTKLTDDQKY GMIEAIAHLI HRDYDAIVKD FVKLGFIPDG VNLAPILPVL AKVFDQALEG 501: GGAKNINFQE LAADLAQITF DYPFRIPPYF ALIIRAIGVL EGIALVGNPE FAIVDEAYPY IAQRLLTDES PRLREALRYT IYGKTGVFDA ERFIDVMQAF 601: ETFITAAKSG GGEDMNGGMA EMALMQSKTS SLVPMFPASA SQPDQPVQTR VALSFLLSEK GNFFREFLLD EIVKGIDAIT REQLVQAMAV FGFRNATPIF 701: GMLPPTLGPF KPAALLPSVT EEDKVILNNV QKVIEFLTAR SSMSNNPDQV VDVSQVVREL LPVLPGISAT VLPEILSRLG SRVMARIVRD AFL |
||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)