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AT3G03720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24709150 (2014): endoplasmic reticulum
  • PMID:24709150 (2014): plant-type vacuole
  • PMID:26748395 (2016): plant-type vacuole plant-type vacuole membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cationic amino acid transporter 4
Curator
Summary (TAIR10)
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.
Computational
Description (TAIR10)
cationic amino acid transporter 4 (CAT4); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Protein of unknown function DUF295 (InterPro:IPR005174), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 2 (TAIR:AT1G58030.1); Has 38139 Blast hits to 35862 proteins in 2359 species: Archae - 591; Bacteria - 30521; Metazoa - 2149; Fungi - 2872; Plants - 748; Viruses - 0; Other Eukaryotes - 1258 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0531eggNOG:KOG1286EMBL:BT008369EMBL:EU351234
EMBL:EU351237EMBL:EU351242EMBL:EU351244EMBL:EU351247
EnsemblPlants:AT3G03720EnsemblPlants:AT3G03720.1entrez:821176ExpressionAtlas:B0FUL1
GO:GO:0005773GO:GO:0009705GO:GO:0015171GO:GO:0016021
GO:GO:0055085hmmpanther:PTHR11785hmmpanther:PTHR11785:SF379InterPro:IPR002293
PANTHER:PTHR11785PaxDb:B0FUL1Pfam:PF03478Pfam:PF13520
Pfam:PF13906Pfam:Q8W4K3STRING:3702.AT3G03720.1tair10-symbols:CAT4
TMHMM:TMhelixUniProt:B0FUK3UniProt:B0FUL1UniProt:Q8W4K3
Coordinates (TAIR10) chr3:-:925870..930974
Molecular Weight (calculated) 86379.40 Da
IEP (calculated) 6.37
GRAVY (calculated) 0.47
Length 801 amino acids
Sequence (TAIR10)
(BLAST)
001: MCLRIGKAVL WVDEETRDYL VVWNYDGFFA YHKKGDDKNN WKVIQPLMNQ RCVDMVCKES KLYVLTDTHV TVLDFSHADA SPIQCASFKS PNYGNDSFCG
101: KNLAVTLSGQ VLIVIHSGGV YKMDPKSLEW SRTNSLGDEA FIFDLGITVA AKDGVMKNCI YFYADPPYRP RRRFVRNAES DGFALNRLEN QTGVDSAKLV
201: DMNSLVRRKQ VDSVHLIKND GPHQLAKKLS AVDLVAIGVG TTIGAGVYIL VGTVAREHTG PALAVSFFIA GVAAALSACC YAELASRCPS AGSAYHYAYI
301: CLGEGIAWLV GWALVLDYTI GGSAIARGIT PNLASFFGGL DNLPVFLARQ TIPGVGIVVD PCAALLIMIV TILLCFGIKE SSTVQAIVTS VNVCTLVFII
401: VVGGYLACKT GWVGYDLPSG YFPFGLNGIL AGSAVVFFSY IGFDTVTSTA EEVKNPQRDL PLGIGIALLI CCILYMLLSV VIVGLVPYYS LNPDTPISSA
501: FGDSGMQWAA YILTTGAITA LCASLLGSLL AQPRIFMAMA RDGLLPAFFS EISPRTQVPV KSTIAIGVLA AALAFFMDVA QLSEMVSVGT LMAFTAVAVC
601: VLVLRYVPPD GVPLSSSSQT LSDTDESRAE TENFLVDAIE SSDSPLLGNE TARDEKYFGK RRKIAAWSIA LVCIGVLGLA SAASAERLPS FPRFTICGVS
701: AVILLGSLIT LGYIDEDEER HNFGHKGGFL CPFVPYLPVL CILINTYLII NIGAGTWIRV LIWLLIGSMI YIFYGRSHSL LNNAVYVPTM TCTRKTTDHL
801: A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)