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AT2G02040.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22923678 (2012): plant-type vacuole
  • PMID:22430844 (2012): Golgi
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): plant-type vacuole
  • PMID:15539469 (2004): plant-type vacuole
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : peptide transporter 2
Curator
Summary (TAIR10)
Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.
Computational
Description (TAIR10)
peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink).
Protein Annotations
BioGrid:138eggNOG:COG3104eggNOG:KOG1237EMBL:AC006532
EMBL:AF372946EMBL:AY143954EMBL:CP002685EMBL:L39082
EMBL:X77503EnsemblPlants:AT2G02040EnsemblPlants:AT2G02040.1entrez:814735
GeneID:814735Genevisible:P46032GO:GO:0000325GO:GO:0005773
GO:GO:0005774GO:GO:0005794GO:GO:0009705GO:GO:0015031
GO:GO:0015197GO:GO:0015334GO:GO:0015833GO:GO:0016021
GO:GO:0042936GO:GO:0042937GO:GO:0042938GO:GO:0042939
Gramene:AT2G02040.1HOGENOM:HOG000237400InParanoid:P46032IntAct:P46032
InterPro:IPR000109InterPro:IPR018456InterPro:IPR020846KEGG:ath:AT2G02040
OMA:ERGFTELPaxDb:P46032Pfam:P46032Pfam:PF00854
PhylomeDB:P46032PIR:C84432PIR:S46236PRIDE:P46032
PRO:PR:P46032PROSITE:PS01022PROSITE:PS01023ProteinModelPortal:P46032
Proteomes:UP000006548RefSeq:NP_178313.1scanprosite:PS01022scanprosite:PS01023
SMR:P46032STRING:3702.AT2G02040.1SUPFAM:SSF103473TAIR:AT2G02040
tair10-symbols:ATPTR2tair10-symbols:ATPTR2-Btair10-symbols:NTR1tair10-symbols:PTR2
tair10-symbols:PTR2-BTCDB:2.A.17.3.2TMHMM:TMhelixUniGene:At.22261
UniGene:At.24145UniProt:P46032
Coordinates (TAIR10) chr2:+:487542..489707
Molecular Weight (calculated) 64424.70 Da
IEP (calculated) 5.34
GRAVY (calculated) 0.26
Length 585 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSIEEEARP LIEEGLILQE VKLYAEDGSV DFNGNPPLKE KTGNWKACPF ILGNECCERL AYYGIAGNLI TYLTTKLHQG NVSAATNVTT WQGTCYLTPL
101: IGAVLADAYW GRYWTIACFS GIYFIGMSAL TLSASVPALK PAECIGDFCP SATPAQYAMF FGGLYLIALG TGGIKPCVSS FGADQFDDTD SRERVRKASF
201: FNWFYFSINI GALVSSSLLV WIQENRGWGL GFGIPTVFMG LAIASFFFGT PLYRFQKPGG SPITRISQVV VASFRKSSVK VPEDATLLYE TQDKNSAIAG
301: SRKIEHTDDC QYLDKAAVIS EEESKSGDYS NSWRLCTVTQ VEELKILIRM FPIWASGIIF SAVYAQMSTM FVQQGRAMNC KIGSFQLPPA ALGTFDTASV
401: IIWVPLYDRF IVPLARKFTG VDKGFTEIQR MGIGLFVSVL CMAAAAIVEI IRLHMANDLG LVESGAPVPI SVLWQIPQYF ILGAAEVFYF IGQLEFFYDQ
501: SPDAMRSLCS ALALLTNALG NYLSSLILTL VTYFTTRNGQ EGWISDNLNS GHLDYFFWLL AGLSLVNMAV YFFSAARYKQ KKASS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)